Merge branch 'soumyadip-master-patch-80895' into 'latest'

Soumyadip master patch 80895

See merge request !172

README.md

 # tsi-ccdoc
 
+## Build Process
+
+ - The two branches *latest* and *master* corresponds to two branches in https://readthedocs.org/projects/tsi-ccdoc/. 
+   - You need to be logged in to with authorized user to view/manage the builds. 
+ - After pushing changes to a branch the build has to be triggered manually from above link to make it live.
+ - Changes are made to latest branch first and then tested before merging/building to master.
 

_mac/applicationLibraries.xml

@@ -25,8 +25,6 @@
     </library>
     <library name="Python 3.8 (kubeflow) interpreter library">
       <CLASSES>
-        <root url="file:///usr/local/Cellar/python@3.8/3.8.5/Frameworks/Python.framework/Versions/3.8/lib/python3.8" />
-        <root url="file:///usr/local/Cellar/python@3.8/3.8.5/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload" />
         <root url="file://$USER_HOME$/IdeaProjects/tsi/kubeflow/venv/lib/python3.8/site-packages" />
         <root url="file://$USER_HOME$/Library/Caches/JetBrains/IdeaIC2020.2/python_stubs/75453827" />
         <root url="file://$APPLICATION_PLUGINS_DIR$/python-ce/helpers/python-skeletons" />
@@ -38,8 +36,6 @@
       </CLASSES>
       <JAVADOC />
       <SOURCES>
-        <root url="file:///usr/local/Cellar/python@3.8/3.8.5/Frameworks/Python.framework/Versions/3.8/lib/python3.8" />
-        <root url="file:///usr/local/Cellar/python@3.8/3.8.5/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload" />
         <root url="file://$USER_HOME$/IdeaProjects/tsi/kubeflow/venv/lib/python3.8/site-packages" />
         <root url="file://$USER_HOME$/Library/Caches/JetBrains/IdeaIC2020.2/python_stubs/75453827" />
         <root url="file://$APPLICATION_PLUGINS_DIR$/python-ce/helpers/python-skeletons" />

aws.xml

+<application>
+  <component name="aws">
+    <option name="promptedForTelemetry" value="true" />
+  </component>
+</application>
\ No newline at end of file

csv-plugin.xml

 <application>
   <component name="CsvEditorSettings">
-    <option name="CURRENT_PLUGIN_VERSION" value="2.14.1" />
+    <option name="CURRENT_PLUGIN_VERSION" value="2.14.3" />
   </component>
 </application>
\ No newline at end of file

filetypes.xml

@@ -2,8 +2,8 @@
   <component name="FileTypeManager" version="17">
     <extensionMap>
       <mapping pattern="Prototype of NFS and K8S cluster" type="HTML" />
-      <mapping ext="main.kts" type="Kotlin" />
       <mapping pattern="trash2" type="PLAIN_TEXT" />
+      <mapping pattern="1" type="PLAIN_TEXT" />
       <mapping pattern="result" type="PLAIN_TEXT" />
       <mapping pattern="http2fa" type="PLAIN_TEXT" />
       <mapping pattern="tmp" type="PLAIN_TEXT" />
@@ -17,6 +17,7 @@
       <mapping pattern=".terraform.tfstate.lock.info" type="PLAIN_TEXT" />
       <mapping pattern="demo1" type="PLAIN_TEXT" />
       <mapping pattern="ResOps practical" type="PLAIN_TEXT" />
+      <mapping ext="1046" type="PLAIN_TEXT" />
       <mapping ext="tmp" type="PLAIN_TEXT" />
       <mapping ext="bak" type="PLAIN_TEXT" />
       <mapping ext="0_x4" type="PLAIN_TEXT" />
@@ -24,7 +25,9 @@
       <mapping ext="in" type="PLAIN_TEXT" />
       <mapping ext="seed" type="PLAIN_TEXT" />
       <mapping ext="pub" type="PLAIN_TEXT" />
+      <mapping ext="vcf" type="PLAIN_TEXT" />
       <mapping ext="me" type="PLAIN_TEXT" />
+      <mapping ext="ipnb" type="PLAIN_TEXT" />
       <mapping ext="ori" type="PLAIN_TEXT" />
       <mapping ext="auth" type="PLAIN_TEXT" />
       <mapping ext="doctree" type="PLAIN_TEXT" />
@@ -39,6 +42,8 @@
       <mapping ext="jinja" type="YAML" />
       <removed_mapping ext="jinja" approved="true" type="YAML_EX" />
       <removed_mapping ext="nf" approved="true" type="HCL" />
+      <mapping ext="gradle.kts" type="Kotlin" />
+      <mapping ext="main.kts" type="Kotlin" />
     </extensionMap>
   </component>
 </application>
\ No newline at end of file

find.xml

@@ -14,5 +14,6 @@
     <mask>*.properties</mask>
     <mask>*.java</mask>
     <mask>*.auth</mask>
+    <mask>*.py</mask>
   </component>
 </application>
\ No newline at end of file

grazie_global.xml

+<application>
+  <component name="GraziConfig">
+    <option name="enabledGrammarStrategies">
+      <set>
+        <option value="PythonCore:Python" />
+        <option value="nl.rubensten.texifyidea:Latex" />
+        <option value="org.asciidoctor.intellij.asciidoc:AsciiDoc" />
+        <option value="tanvd.grazi:JSON" />
+      </set>
+    </option>
+  </component>
+</application>
\ No newline at end of file

lightEdit.xml

+<application>
+  <component name="LightEdit">
+    <option name="supportedFilePatterns">
+      <list>
+        <option value="*.conf" />
+        <option value="*.ini" />
+        <option value="*.json" />
+        <option value="*.log" />
+        <option value="*.md" />
+        <option value="*.sh" />
+        <option value="*.txt" />
+        <option value="*.xml" />
+        <option value="*.yml" />
+      </list>
+    </option>
+  </component>
+</application>
\ No newline at end of file

ui.lnf.xml

 <application>
   <component name="UISettings">
+    <option name="IDE_AA_TYPE" value="Greyscale" />
     <option name="MAX_LOOKUP_WIDTH2" value="726" />
   </component>
 </application>
\ No newline at end of file

vcs.xml

@@ -158,6 +158,14 @@
           <option name="url" value="https://gitlab.com/davidyuyuan/livercancer.git" />
           <option name="userName" value="" />
         </UrlAndUserName>
+        <UrlAndUserName>
+          <option name="url" value="https://github.com/YiannisGkoufas/dlf-ebi.git" />
+          <option name="userName" value="" />
+        </UrlAndUserName>
+        <UrlAndUserName>
+          <option name="url" value="https://github.com/davidyuyuan/ebi-wu" />
+          <option name="userName" value="" />
+        </UrlAndUserName>
       </list>
     </option>
     <option name="cloneParentDir" value="$USER_HOME$/IdeaProjects/davidyuyuan" />