Commit aebaf03a authored by Karoly Erdos's avatar Karoly Erdos
Browse files

Add missing tests for the negative checklist tests

Add the newly generated, fixed checklists
Fix valid and invalid sample examples
parent 6cf84833
This diff is collapsed.
This diff is collapsed.
This diff is collapsed.
This diff is collapsed.
......@@ -4,78 +4,78 @@
"taxonId" : 9606,
"attributes" : {
"ENA checklist" : [ {
"text" : "ERC000014"
"value" : "ERC000014"
} ],
"INSDC center name" : [ {
"text" : "OREGON STATE UNIVERSITY , CORVALLIS, OREGON, UNITED STATES"
"value" : "OREGON STATE UNIVERSITY , CORVALLIS, OREGON, UNITED STATES"
} ],
"INSDC first public" : [ {
"text" : "2015-07-16T15:54:30Z"
"value" : "2015-07-16T15:54:30Z"
} ],
"INSDC last update" : [ {
"text" : "2016-10-21T09:40:47Z"
"value" : "2016-10-21T09:40:47Z"
} ],
"INSDC status" : [ {
"text" : "public"
"value" : "public"
} ],
"SRA accession" : [ {
"text" : "ERS789090"
"value" : "ERS789090"
} ],
"alias" : [ {
"text" : "BN2153_V1V2_93_BBY10M"
"value" : "BN2153_V1V2_93_BBY10M"
} ],
"collection date" : [ {
"text" : "2013"
"value" : "2013"
} ],
"environment (biome)": [ {
"text": "NA"
"value": "NA"
} ],
"environment (feature)": [ {
"text": "NA"
"value": "NA"
} ],
"environment (material)": [ {
"text": "NA"
"value": "NA"
} ],
"description" : [ {
"text" : "Human body-site associated samples for validation of ARK algorithm"
"value" : "Human body-site associated samples for validation of ARK algorithm"
} ],
"geographic location (country and/or sea)" : [ {
"text" : "Tanzania"
"value" : "Tanzania"
} ],
"geographic location (latitude)" : [ {
"text" : "-6.812414",
"value" : "-6.812414",
"units" : "DD"
} ],
"geographic location (longitude)" : [ {
"text" : "39.297048",
"value" : "39.297048",
"units" : "DD"
} ],
"host body product" : [ {
"text" : "Vagina",
"value" : "Vagina",
"ontologyTerms" : [ "http://purl.obolibrary.org/obo/UBERON_0000996" ]
} ],
"human-associated environmental package" : [ {
"text" : "human-associated"
"value" : "human-associated"
} ],
"investigation type" : [ {
"text" : "metagenome"
"value" : "metagenome"
} ],
"miscellaneous parameter" : [ {
"text" : "adult",
"value" : "adult",
"ontologyTerms" : [ "http://www.ebi.ac.uk/efo/EFO_0001272" ]
} ],
"organism" : [ {
"text" : "Homo sapiens",
"value" : "Homo sapiens",
"ontologyTerms" : [ "http://purl.obolibrary.org/obo/NCBITaxon_9606" ]
} ],
"sequencing method" : [ {
"text" : "Illumina MiSeq"
"value" : "Illumina MiSeq"
} ],
"synonym" : [ {
"text" : "BN2153_V1V2_93_BBY10M"
"value" : "BN2153_V1V2_93_BBY10M"
} ],
"title" : [ {
"text" : "ARK: Aggregate of Reads by K-Means for Estimation of Bacterial Community Composition"
"value" : "ARK: Aggregate of Reads by K-Means for Estimation of Bacterial Community Composition"
} ]
}
}
\ No newline at end of file
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment