Add functional tests for target and assay classifications

functional_tests/run_functional_tests.py

@@ -7,7 +7,9 @@ import argparse
 
 from specific_tests import fun_test_simple_query, fun_test_query_with_context, fun_test_property_config, \
     fun_test_group_config, fun_test_facets_group_config, fun_test_get_document, fun_test_id_properties, \
-    fun_test_get_context_data, fun_test_search_parsing, fun_test_url_shortening, fun_test_element_usage
+    fun_test_get_context_data, fun_test_search_parsing, fun_test_url_shortening, fun_test_element_usage, \
+    fun_test_go_slim_target_classification, fun_test_in_vivo_assay_classification, \
+    fun_test_organism_taxonomy_target_classification, fun_test_protein_target_classification
 
 PARSER = argparse.ArgumentParser()
 PARSER.add_argument('server_base_path', help='server base path to run the tests against',
@@ -26,7 +28,9 @@ def run():
     for test_module in [fun_test_simple_query, fun_test_query_with_context, fun_test_property_config,
                         fun_test_group_config, fun_test_facets_group_config, fun_test_get_document,
                         fun_test_id_properties, fun_test_get_context_data, fun_test_search_parsing,
-                        fun_test_url_shortening, fun_test_element_usage]:
+                        fun_test_url_shortening, fun_test_element_usage, fun_test_go_slim_target_classification,
+                        fun_test_in_vivo_assay_classification, fun_test_organism_taxonomy_target_classification,
+                        fun_test_protein_target_classification]:
         test_module.run_test(ARGS.server_base_path, ARGS.delayed_jobs_server_base_path)
 
 

functional_tests/specific_tests/fun_test_go_slim_target_classification.py

+# pylint: disable=import-error,unused-argument
+"""
+Module that tests a the go slim target classification
+"""
+from specific_tests import utils
+
+
+def run_test(server_base_url, delayed_jobs_server_base_path):
+    """
+    Tests getting the go slim target classification
+    :param server_base_url: base url of the running server. E.g. http://127.0.0.1:5000
+    :param delayed_jobs_server_base_path: base path for the delayed_jobs
+    """
+
+    print('-------------------------------------------')
+    print('Testing getting the go slim target classification')
+    print('-------------------------------------------')
+
+    url = f'{server_base_url}/visualisations/target_classifications/go_slim'
+    utils.assert_get_request_succeeds(url)

functional_tests/specific_tests/fun_test_in_vivo_assay_classification.py

+# pylint: disable=import-error,unused-argument
+"""
+Module that tests a the in vivo assay classification
+"""
+from specific_tests import utils
+
+
+def run_test(server_base_url, delayed_jobs_server_base_path):
+    """
+    Tests getting the in vivo assay classification
+    :param server_base_url: base url of the running server. E.g. http://127.0.0.1:5000
+    :param delayed_jobs_server_base_path: base path for the delayed_jobs
+    """
+
+    print('-------------------------------------------')
+    print('Testing getting the in vivo assay classification')
+    print('-------------------------------------------')
+
+    url = f'{server_base_url}/visualisations/assay_classifications/in_vivo'
+    utils.assert_get_request_succeeds(url)

functional_tests/specific_tests/fun_test_organism_taxonomy_target_classification.py

+# pylint: disable=import-error,unused-argument
+"""
+Module that tests a the organism taxonomy classification
+"""
+from specific_tests import utils
+
+
+def run_test(server_base_url, delayed_jobs_server_base_path):
+    """
+    Tests getting the organism taxonomy classification
+    :param server_base_url: base url of the running server. E.g. http://127.0.0.1:5000
+    :param delayed_jobs_server_base_path: base path for the delayed_jobs
+    """
+
+    print('-------------------------------------------')
+    print('Testing getting the organism taxonomy classification')
+    print('-------------------------------------------')
+
+    url = f'{server_base_url}/visualisations/target_classifications/organism_taxonomy'
+    utils.assert_get_request_succeeds(url)

functional_tests/specific_tests/fun_test_protein_target_classification.py

+# pylint: disable=import-error,unused-argument
+"""
+Module that tests a the protein target classification
+"""
+from specific_tests import utils
+
+
+def run_test(server_base_url, delayed_jobs_server_base_path):
+    """
+    Tests getting the protein target classification
+    :param server_base_url: base url of the running server. E.g. http://127.0.0.1:5000
+    :param delayed_jobs_server_base_path: base path for the delayed_jobs
+    """
+
+    print('-------------------------------------------')
+    print('Testing getting the protein target classification')
+    print('-------------------------------------------')
+
+    url = f'{server_base_url}/visualisations/target_classifications/protein_classification'
+    utils.assert_get_request_succeeds(url)