Commit 576eb22b authored by Peter Walter's avatar Peter Walter
Browse files

update for release of data portal

parent 906d8800
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<div class="columns medium-12" id="local-title">
<h1><a href="/covid-19" title="Back to Covid-19 Portal">COVID-19 Portal</a></h1>
<h1><a href="/covid-19" title="Back to Covid-19 Data Portal">COVID-19 Data Portal</a></h1>
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<div class="masthead-inner row">
<!-- local-title -->
<div class="columns medium-12" id="local-title">
<h1><a href="/covid-19" title="Back to Covid-19 Portal">COVID-19 Portal</a></h1>
<h1><a href="/covid-19" title="Back to Covid-19 Data Portal">COVID-19 Data Portal</a></h1>
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An unprecedented number of scientific efforts are taking place worldwide in order to help combat the new coronavirus epidemic (COVID-19). One of the biggest challenges in this fast-moving situation is to share data and findings in a coordinated way, in order to understand the disease and to develop treatments and vaccines.
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<p class="lead">
To address this challenge, EMBL-EBI has set up the COVID-19 Portal, which will bring together relevant datasets submitted to EMBL-EBI and other major centres for biomedical data. The aim is to facilitate data sharing and analysis, and to accelerate coronavirus research.
To address this challenge, EMBL-EBI has set up the COVID-19 Data Portal, which will bring together relevant datasets submitted to EMBL-EBI and other major centres for biomedical data. The aim is to facilitate data sharing and analysis, and to accelerate coronavirus research.
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<h2>
What is the COVID-19 Portal?
What is the COVID-19 Data Portal?
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<p>
The COVID-19 Portal will enable researchers to upload, access and analyse COVID-19 related reference data and specialist datasets.
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<a href="https://www.covid19dataportal.org"><img style="background-color:white" src="https://www.covid19dataportal.org/assets/img/CV19DP_logo_oneliner.svg" width="400"></a>
<p>
<p>
In the first instance, as the COVID-19 Portal is being built, all COVID-19 data stored at EMBL-EBI is being aggregated into a dedicated page on the Pathogen Portal. EMBL-EBI expects that during April, a first version of the COVID-19 Portal will be live. Watch this page for updates.
The COVID-19 Data Portal will enable researchers to upload, access and analyse COVID-19 related reference data and specialist datasets.
</p>
<p>
<a class="button external" href="https://www.ebi.ac.uk/ena/pathogens/covid-19">See Pathogen Portal COVID-19 data</a>
<a class="button external" href="https://www.covid19dataportal.org">See COVID-19 Data Portal</a>
</p>
<p>
The COVID-19 Portal will be the primary entry point into the functions of a wider project, the European COVID-19 Data Platform.
The COVID-19 Data Portal will be the primary entry point into the functions of a wider project, the European COVID-19 Data Platform.
</p>
<h2>
What is the COVID-19 Data Platform?
What is the European COVID-19 Data Platform?
</h2>
<p>
Rapid and open sharing of data greatly accelerates research and discovery, which is essential to respond to the COVID-19 pandemic. The European Commission and EMBL’s European Bioinformatics Institute (EMBL-EBI), together with EU Member States and research partners such as ELIXIR, are deploying a dedicated European COVID-19 Data Platform that will enable the rapid collection and comprehensive data sharing of available research data from different sources for the European and global research communities. This joint effort is a priority pilot to realise the objectives of the <a href="https://www.eosc-portal.eu/">European Open Science Cloud (EOSC)</a>.
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SARS-CoV-2 Data Hubs – will organise the flow of SARS-CoV-2 outbreak sequence data and provide comprehensive open data sharing for the European and global research communities
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<li>
COVID-19 Portal – will bring together and continuously update relevant COVID-19 datasets and tools, will host sequence data sharing and will facilitate access to other SARS-CoV-2 resources
COVID-19 Data Portal – will bring together and continuously update relevant COVID-19 datasets and tools, will host sequence data sharing and will facilitate access to other SARS-CoV-2 resources
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</ul>
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</p>
<h2>
COVID-19 Portal - next steps
COVID-19 Data Portal - next steps
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<p><strong>
Aggregate data hosted by EMBL-EBI
</strong></p>
<p>
To rapidly populate the COVID-19 Portal, EMBL-EBI will bring together COVID-19 datasets that have been submitted to its public databases, including <a href="https://www.ebi.ac.uk/ena">ENA</a>, <a href="https://www.uniprot.org/">UniProt</a>, <a href="https://www.ebi.ac.uk/pdbe/node/1">PDBe</a>, <a href="https://www.ebi.ac.uk/pdbe/emdb/">EMDB</a>, <a href="https://www.ebi.ac.uk/gxa/home">Expression Atlas</a> and <a href="https://europepmc.org/">Europe PMC</a>. The data, which have so far been collated in the <a href="https://www.ebi.ac.uk/ena/pathogens/covid-19">Pathogen Portal</a>, include genes, protein structures, electron microscopy data and scientific publications.
To rapidly populate the COVID-19 Data Portal, EMBL-EBI will bring together COVID-19 datasets that have been submitted to its public databases, including <a href="https://www.ebi.ac.uk/ena">ENA</a>, <a href="https://www.uniprot.org/">UniProt</a>, <a href="https://www.ebi.ac.uk/pdbe/node/1">PDBe</a>, <a href="https://www.ebi.ac.uk/pdbe/emdb/">EMDB</a>, <a href="https://www.ebi.ac.uk/gxa/home">Expression Atlas</a> and <a href="https://europepmc.org/">Europe PMC</a>.
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<p><strong>
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