ensembl-hive
2.1
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Public Member Functions | |
public | unikey () |
public | logic_name () |
public | module () |
public | parameters () |
public | failed_job_tolerance () |
public | max_retry_count () |
public | can_be_empty () |
public | priority () |
public | meadow_type () |
public | analysis_capacity () |
public | get_compiled_module_name () |
public String | url () |
public | display_name () |
public Bio::EnsEMBL::Hive::AnalysisStats | stats () |
public | jobs_collection () |
public | control_rules_collection () |
public | dataflow_rules_collection () |
public | toString () |
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public | collection () |
public | unikey () |
public | add_new_or_update () |
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public Bio::EnsEMBL::Hive::Storable | new () |
public Int | dbID () |
public Bio::EnsEMBL::Hive::DBSQL::BaseAdaptor | adaptor () |
public | DESTROY () |
public | AUTOLOAD () |
An Analysis object represents a "stage" of the Hive pipeline that groups together all jobs that share the same module and the same common parameters. Individual Jobs are said to "belong" to an Analysis. Control rules unblock when their condition Analyses are done.
public Bio::EnsEMBL::Hive::Analysis::analysis_capacity | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::can_be_empty | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::control_rules_collection | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::dataflow_rules_collection | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::display_name | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::failed_job_tolerance | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::get_compiled_module_name | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::jobs_collection | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::logic_name | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::max_retry_count | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::meadow_type | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::module | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::parameters | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::priority | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::AnalysisStats Bio::EnsEMBL::Hive::Analysis::stats | ( | ) |
Arg [1] : none Example :
Description: returns either the previously cached AnalysisStats object, or if it is missing - pulls a fresh one from the DB. Returntype : Bio::EnsEMBL::Hive::AnalysisStats object Exceptions : none Caller : general
public Bio::EnsEMBL::Hive::Analysis::toString | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::unikey | ( | ) |
Undocumented method
public String Bio::EnsEMBL::Hive::Analysis::url | ( | ) |
Arg [1] : none Example :
Description: Constructs a URL string for this database connection Follows the general URL rules. Returntype : string of format mysql://<user>:<pass><host>:<port>/<dbname>/analysis?logic_name=<name> Exceptions : none Caller : general