ensembl-hive
2.1
|
public Bio::EnsEMBL::Hive::PipeConfig::TableDumperZipper_conf::pipeline_analyses | ( | ) |
Description : Implements pipeline_analyses() interface method of Bio::EnsEMBL::Hive::PipeConfig::HiveGeneric_conf that defines the structure of the pipeline: analyses, jobs, rules, etc. Here it defines two analyses:
'find_tables' generates a list of tables whose names match the pattern #only_tables# Each job of this analysis will dataflow (create jobs) via branch #2 into 'table_dumper' analysis.
'table_dumper' dumps table contents (possibly with table definition) and flows via branch #1 into 'file_compressor' analysis.
'file_compressor' compresses the dump file
public Bio::EnsEMBL::Hive::PipeConfig::TableDumperZipper_conf::pipeline_wide_parameters | ( | ) |
Description : Interface method that should return a hash of pipeline_wide_parameter_name->pipeline_wide_parameter_value pairs. The value doesn't have to be a scalar, can be any Perl structure (will be stringified and de-stringified automagically).