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ensembl-gh-mirror
ensembl-hive
Commits
051fa22e
Commit
051fa22e
authored
Jan 16, 2015
by
Leo Gordon
Browse files
bugfix: specialization failures should not be considered critical
Conflicts: modules/Bio/EnsEMBL/Hive/Worker.pm
parent
baca69ba
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modules/Bio/EnsEMBL/Hive/Worker.pm
modules/Bio/EnsEMBL/Hive/Worker.pm
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modules/Bio/EnsEMBL/Hive/Worker.pm
View file @
051fa22e
...
...
@@ -627,9 +627,11 @@ sub specialize_and_compile_wrapper {
my
$msg
=
$@
;
chomp
$msg
;
$self
->
worker_say
(
"
[re]specialization failed:
\t
$msg
"
);
$self
->
adaptor
->
db
->
get_LogMessageAdaptor
()
->
store_worker_message
(
$self
->
dbID
,
$msg
,
1
);
$self
->
cause_of_death
('
SEE_MSG
')
unless
(
$self
->
cause_of_death
());
# some specific causes could have been set prior to die "...";
my
$is_error
=
$self
->
cause_of_death
()
ne
'
NO_ROLE
';
$self
->
adaptor
->
db
->
get_LogMessageAdaptor
()
->
store_worker_message
(
$self
,
$msg
,
$is_error
);
};
if
(
!
$self
->
cause_of_death
()
)
{
...
...
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