fixing permissions of all files in one go

18fd495f · Leo Gordon · 8cb2bdf9 · 18fd495f · 18fd495f · 18fd495f
Commit 18fd495f authored Oct 31, 2012 by Leo Gordon
20 changed files
--- a/modules/Bio/EnsEMBL/Hive.pm
+++ b/modules/Bio/EnsEMBL/Hive.pm
--- a/modules/Bio/EnsEMBL/Hive/AnalysisCtrlRule.pm
+++ b/modules/Bio/EnsEMBL/Hive/AnalysisCtrlRule.pm
--- a/modules/Bio/EnsEMBL/Hive/AnalysisJob.pm
+++ b/modules/Bio/EnsEMBL/Hive/AnalysisJob.pm
--- a/modules/Bio/EnsEMBL/Hive/AnalysisStats.pm
+++ b/modules/Bio/EnsEMBL/Hive/AnalysisStats.pm
--- a/modules/Bio/EnsEMBL/Hive/DBSQL/AnalysisCtrlRuleAdaptor.pm
+++ b/modules/Bio/EnsEMBL/Hive/DBSQL/AnalysisCtrlRuleAdaptor.pm
--- a/modules/Bio/EnsEMBL/Hive/DBSQL/DBAdaptor.pm
+++ b/modules/Bio/EnsEMBL/Hive/DBSQL/DBAdaptor.pm
--- a/modules/Bio/EnsEMBL/Hive/DBSQL/DataflowRuleAdaptor.pm
+++ b/modules/Bio/EnsEMBL/Hive/DBSQL/DataflowRuleAdaptor.pm
--- a/modules/Bio/EnsEMBL/Hive/DataflowRule.pm
+++ b/modules/Bio/EnsEMBL/Hive/DataflowRule.pm
--- a/modules/Bio/EnsEMBL/Hive/DependentOptions.pm
+++ b/modules/Bio/EnsEMBL/Hive/DependentOptions.pm
--- a/modules/Bio/EnsEMBL/Hive/Extensions.pm
+++ b/modules/Bio/EnsEMBL/Hive/Extensions.pm
--- a/modules/Bio/EnsEMBL/Hive/Process.pm
+++ b/modules/Bio/EnsEMBL/Hive/Process.pm
--- a/modules/Bio/EnsEMBL/Hive/Queen.pm
+++ b/modules/Bio/EnsEMBL/Hive/Queen.pm
--- a/modules/Bio/EnsEMBL/Hive/RunnableDB/Dummy.pm
+++ b/modules/Bio/EnsEMBL/Hive/RunnableDB/Dummy.pm
--- a/modules/Bio/EnsEMBL/Hive/RunnableDB/MySQLTransfer.pm
+++ b/modules/Bio/EnsEMBL/Hive/RunnableDB/MySQLTransfer.pm
--- a/modules/Bio/EnsEMBL/Hive/RunnableDB/NotifyByEmail.pm
+++ b/modules/Bio/EnsEMBL/Hive/RunnableDB/NotifyByEmail.pm
--- a/modules/Bio/EnsEMBL/Hive/RunnableDB/SqlCmd.pm
+++ b/modules/Bio/EnsEMBL/Hive/RunnableDB/SqlCmd.pm
--- a/modules/Bio/EnsEMBL/Hive/RunnableDB/SystemCmd.pm
+++ b/modules/Bio/EnsEMBL/Hive/RunnableDB/SystemCmd.pm
--- a/modules/Bio/EnsEMBL/Hive/URLFactory.pm
+++ b/modules/Bio/EnsEMBL/Hive/URLFactory.pm
--- a/modules/Bio/EnsEMBL/Hive/Utils.pm
+++ b/modules/Bio/EnsEMBL/Hive/Utils.pm
--- a/modules/Bio/EnsEMBL/Hive/Utils/Config.pm
+++ b/modules/Bio/EnsEMBL/Hive/Utils/Config.pm