From 5c57bedffae5eb2cf0cb2e3d121c466ec79a4779 Mon Sep 17 00:00:00 2001
From: Miguel Pignatelli <mp@ebi.ac.uk>
Date: Mon, 16 Dec 2013 16:53:47 +0000
Subject: [PATCH] Final semicolons on test queries are now optional (they were
forbidden before)
---
modules/Bio/EnsEMBL/Hive/RunnableDB/SqlHealthcheck.pm | 5 +++++
1 file changed, 5 insertions(+)
diff --git a/modules/Bio/EnsEMBL/Hive/RunnableDB/SqlHealthcheck.pm b/modules/Bio/EnsEMBL/Hive/RunnableDB/SqlHealthcheck.pm
index 47cccb698..079340eda 100644
--- a/modules/Bio/EnsEMBL/Hive/RunnableDB/SqlHealthcheck.pm
+++ b/modules/Bio/EnsEMBL/Hive/RunnableDB/SqlHealthcheck.pm
@@ -136,6 +136,11 @@ sub _run_test {
my $reference_size = $test->{reference_size};
my $logical_test = $test->{logical_test};
+ # Final semicolons are removed if present
+ if ($query =~ /(;\s*$)/) {
+ $query =~ s/$1//;
+ }
+
print "Test description: $description\n";
print "Checking whether the number of rows $logical_test $reference_size\n";
--
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