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ensembl-gh-mirror
ensembl-hive
Commits
7585642c
Commit
7585642c
authored
Jan 16, 2015
by
Leo Gordon
Browse files
pulled in the "non-critical specialization failures" bugfix from upstream
Conflicts: modules/Bio/EnsEMBL/Hive/Worker.pm
parents
95f7a7af
86b742e2
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modules/Bio/EnsEMBL/Hive/Worker.pm
modules/Bio/EnsEMBL/Hive/Worker.pm
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modules/Bio/EnsEMBL/Hive/Worker.pm
View file @
7585642c
...
...
@@ -583,9 +583,11 @@ sub specialize_and_compile_wrapper {
my
$msg
=
$@
;
chomp
$msg
;
$self
->
worker_say
(
"
specialization failed:
\t
$msg
"
);
$self
->
adaptor
->
db
->
get_LogMessageAdaptor
()
->
store_worker_message
(
$self
,
$msg
,
1
);
$self
->
cause_of_death
('
SEE_MSG
')
unless
(
$self
->
cause_of_death
());
# some specific causes could have been set prior to die "...";
my
$is_error
=
$self
->
cause_of_death
()
ne
'
NO_ROLE
';
$self
->
adaptor
->
db
->
get_LogMessageAdaptor
()
->
store_worker_message
(
$self
,
$msg
,
$is_error
);
};
if
(
!
$self
->
cause_of_death
()
)
{
...
...
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