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ensembl-gh-mirror
ensembl-hive
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7aab37ad
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7aab37ad
authored
Sep 10, 2010
by
Leo Gordon
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a8ecec24
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modules/Bio/EnsEMBL/Hive/ProcessWithParams.pm
modules/Bio/EnsEMBL/Hive/ProcessWithParams.pm
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modules/Bio/EnsEMBL/Hive/ProcessWithParams.pm
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7aab37ad
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@@ -9,12 +9,10 @@ Bio::EnsEMBL::Hive::ProcessWithParams
This module extends Bio::EnsEMBL::Hive::Process by implementing the following capabilities:
1) parsing of parameters in the right order of precedence (including built-in defaults, if supplied)
#
# $self->param_init('taxon_id' => 10090, 'source' => 'UniProt');
#
Note: you should only be running the parser $self->param_init(...) manually
if you want to supply built-in defaults, otherwise it will run by itself - no need to worry.
1) parsing of parameters in the right order of precedence (including built-in defaults, if supplied).
This parsing happens automatically and in most cases you should not need to activate it.
However you may want to provide built-in defaults for your RunnableDB
by defining your own param_defaults() method that returns a hashref.
2) reading a parameter's value
#
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