Commit 8139d0a3 authored by Leo Gordon's avatar Leo Gordon
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Updated schema diagram and description file that include param_id_stack and...

Updated schema diagram and description file that include param_id_stack and accu_id_stack in job table.
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docs/hive_schema.png

244 KB | W: | H:

docs/hive_schema.png

239 KB | W: | H:

docs/hive_schema.png
docs/hive_schema.png
docs/hive_schema.png
docs/hive_schema.png
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......@@ -3,11 +3,11 @@
It has been annotated with @-tags.
The following command is used to create HTML documentation:
perl $ENSEMBL_CVS_ROOT_DIR/ensembl/misc-scripts/sql2html.pl -i $ENSEMBL_CVS_ROOT_DIR/ensembl-hive/sql/tables.mysql \
perl $ENSEMBL_CVS_ROOT_DIR/ensembl-production/scripts/sql2html.pl -i $ENSEMBL_CVS_ROOT_DIR/ensembl-hive/sql/tables.mysql \
-o $ENSEMBL_CVS_ROOT_DIR/ensembl-hive/docs/hive_schema.html -d Hive -sort_headers 0 -sort_tables 0
Adding the following line into the header of the previous output will make it look prettier (valid in rel.71):
<link rel="stylesheet" type="text/css" media="all" href="http://static.ensembl.org/minified/f75db6b3a877e4e04329aa1283dec34e.css" />
Adding the following line into the header of the previous output will make it look prettier (valid in rel.72):
<link rel="stylesheet" type="text/css" media="all" href="http://static.ensembl.org/minified/eb8658698ad4d45258b954c2d3f35bad.css" />
*/
......@@ -245,9 +245,11 @@ CREATE TABLE resource_description (
are updated as the work is done, with a final update on completion.
@column job_id autoincrement id
@column prev_job_id previous job which created this one (and passed input_id)
@column prev_job_id previous job which created this one
@column analysis_id the analysis_id needed to accomplish this job.
@column input_id input data passed into Analysis:RunnableDB to control the work
@column param_id_stack a CSV of job_ids whose input_ids contribute to the stack of local variables for the job
@column accu_id_stack a CSV of job_ids whose accu's contribute to the stack of local variables for the job
@column worker_id link to worker table to define which worker claimed this job
@column status state the job is in
@column retry_count number times job had to be reset when worker failed to run it
......
......@@ -3,11 +3,12 @@
It has been annotated with @-tags.
The following command is used to create HTML documentation:
perl $ENSEMBL_CVS_ROOT_DIR/ensembl/misc-scripts/sql2html.pl -i $ENSEMBL_CVS_ROOT_DIR/ensembl-hive/sql/tables.pgsql \
perl $ENSEMBL_CVS_ROOT_DIR/ensembl-production/scripts/sql2html.pl -i $ENSEMBL_CVS_ROOT_DIR/ensembl-hive/sql/tables.pgsql \
-o $ENSEMBL_CVS_ROOT_DIR/ensembl-hive/docs/hive_schema.html -d Hive -sort_headers 0 -sort_tables 0
Adding the following line into the header of the previous output will make it look prettier (valid in rel.71):
<link rel="stylesheet" type="text/css" media="all" href="http://static.ensembl.org/minified/f75db6b3a877e4e04329aa1283dec34e.css" />
Adding the following line into the header of the previous output will make it look prettier (valid in rel.72):
<link rel="stylesheet" type="text/css" media="all" href="http://static.ensembl.org/minified/eb8658698ad4d45258b954c2d3f35bad.css" />
*/
......@@ -247,9 +248,11 @@ CREATE TABLE resource_description (
are updated as the work is done, with a final update on completion.
@column job_id autoincrement id
@column prev_job_id previous job which created this one (and passed input_id)
@column prev_job_id previous job which created this one
@column analysis_id the analysis_id needed to accomplish this job.
@column input_id input data passed into Analysis:RunnableDB to control the work
@column param_id_stack a CSV of job_ids whose input_ids contribute to the stack of local variables for the job
@column accu_id_stack a CSV of job_ids whose accu's contribute to the stack of local variables for the job
@column worker_id link to worker table to define which worker claimed this job
@column status state the job is in
@column retry_count number times job had to be reset when worker failed to run it
......
......@@ -3,11 +3,11 @@
It has been annotated with @-tags.
The following command is used to create HTML documentation:
perl $ENSEMBL_CVS_ROOT_DIR/ensembl/misc-scripts/sql2html.pl -i $ENSEMBL_CVS_ROOT_DIR/ensembl-hive/sql/tables.sqlite \
perl $ENSEMBL_CVS_ROOT_DIR/ensembl-production/scripts/sql2html.pl -i $ENSEMBL_CVS_ROOT_DIR/ensembl-hive/sql/tables.sqlite \
-o $ENSEMBL_CVS_ROOT_DIR/ensembl-hive/docs/hive_schema.html -d Hive -sort_headers 0 -sort_tables 0
Adding the following line into the header of the previous output will make it look prettier (valid in rel.71):
<link rel="stylesheet" type="text/css" media="all" href="http://static.ensembl.org/minified/f75db6b3a877e4e04329aa1283dec34e.css" />
Adding the following line into the header of the previous output will make it look prettier (valid in rel.72):
<link rel="stylesheet" type="text/css" media="all" href="http://static.ensembl.org/minified/eb8658698ad4d45258b954c2d3f35bad.css" />
*/
......@@ -242,9 +242,11 @@ CREATE TABLE resource_description (
are updated as the work is done, with a final update on completion.
@column job_id autoincrement id
@column prev_job_id previous job which created this one (and passed input_id)
@column prev_job_id previous job which created this one
@column analysis_id the analysis_id needed to accomplish this job.
@column input_id input data passed into Analysis:RunnableDB to control the work
@column param_id_stack a CSV of job_ids whose input_ids contribute to the stack of local variables for the job
@column accu_id_stack a CSV of job_ids whose accu's contribute to the stack of local variables for the job
@column worker_id link to worker table to define which worker claimed this job
@column status state the job is in
@column retry_count number times job had to be reset when worker failed to run it
......
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