Commit a305ecc0 authored by Matthieu Muffato's avatar Matthieu Muffato
Browse files

bugfix: SystemCmd could not notice that the process was killed

parent 0be9a5be
......@@ -107,8 +107,7 @@ sub run {
$self->dbc and $self->dbc->disconnect_when_inactive(1); # release this connection for the duration of system() call
my $return_value;
my $stderr = tee_stderr {
$return_value = $? >> 8;
$return_value = system(@cmd_to_run);
$self->dbc and $self->dbc->disconnect_when_inactive(0); # allow the worker to keep the connection open again
......@@ -133,7 +132,16 @@ sub write_output {
my $stderr = $self->param('stderr');
my $flat_cmd = $self->param('flat_cmd');
if ($return_value) {
if ($return_value and not ($return_value >> 8)) {
# The job has been killed. The best is to wait a bit that LSF kills
# the worker too
sleep 30;
# If we reach this point, perhaps it was killed by a user
die sprintf( "'%s' was killed with code=%d\nstderr is: %s\n", $flat_cmd, $return_value, $stderr);
} elsif ($return_value) {
# "Normal" process exit with a non-zero code
$return_value >>= 8;
# We create a dataflow event depending on the exit code of the process.
if (exists $self->param('return_codes_2_branches')->{$return_value}) {
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