Commit f1202d7c authored by Leo Gordon's avatar Leo Gordon
Browse files

removed reference to the deleted Util::Graph::Config

parent 71125626
......@@ -38,7 +38,6 @@ sub _options {
'f|format=s' => \$self->{format},
'o|output=s' => \$self->{output},
'config' => \$self->{config},
'h|help' => \$self->{help},
'm|man' => \$self->{man},
......@@ -92,16 +91,6 @@ sub _process_options {
die "Format was not set and could not guess from ".$self->output().". Please use either way to select it.\n";
}
}
if($self->{config}) {
if(! -f $self->{config}) {
pod2usage({
-message => "ERROR: Cannot find $self->{config}. Check your locations",
-exitvalue => 1,
-verbose => 1
});
}
}
}
sub _write_graph {
......@@ -141,8 +130,8 @@ generate_graph.pl
This program will generate a graphical representation of your hive pipeline.
This includes visalising the flow of data from the different analyses, blocking
rules & table writers. The graph is also coloured to indicate the stage
an analysis is at. The colours & fonts used can be configured via the
C<--config> flag but see the option information about how to do this.
an analysis is at. The colours & fonts used can be configured via
hive_config.json configuration file.
=head1 OPTIONS
......@@ -156,12 +145,6 @@ The format of the file output. See FORMATS for more information
Location of the file to write to.
=item B<--config>
Perl file which will return a Hash when evaluated. The hash is merged into the
default option set for configuring the graphs produced. See
L<Bio::EnsEMBL::Hive::Utils::Graph::Config>
=item B<-reg_conf>
path to a Registry configuration file
......@@ -224,7 +207,7 @@ $Author: lg4 $
=head1 VERSION
$Revision: 1.7 $
$Revision: 1.8 $
=head1 REQUIREMENTS
......
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