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are bound to analysis rather than being distinct

setter analysis share the same adaptor (same database) then use the
logic_name as the url rather than a full url.

added default values of 1 to batch_size and hive_capacity

URL's to specify analysis objects from mysql databases distributed
across a network.  AnalysisJobAdaptor was switched to create jobs with
a cless method that gets the db connection from the analysis object that
is passed.  Thus the system now exists in a distributed state.
The dataflow rule also implements branching via the branch_code.
SimpleRule will be deprecated.

workers) and added methods for reseting jobs for a lost worker.
$queen->register_worker_death($worker) without a defined cause_of_death
will register worker as a FATALITY and reset its unfinished jobs.

Should output into a file and register as a analysis_job_file.

the analysis table/object.  New object class and tables includes a good
guess of what kind of stats I'll need for the Queen to monitor a hive
Also cleaned up some bugs caused by the extraction from compara.