This project is mirrored from https://github.com/Ensembl/ensembl-hive.git. Pull mirroring updated .
  1. 08 Jan, 2021 1 commit
  2. 08 Jan, 2020 1 commit
  3. 01 Jul, 2019 1 commit
  4. 05 Apr, 2019 1 commit
  5. 04 Mar, 2019 2 commits
    • Marek Szuba's avatar
      docs/xhive/analysis_diagram: decode subprocess output · 844ceb20
      Marek Szuba authored
      Our documentation builder calls external scripts to produce Graphviz
      dot code representing pipelines.
      
      On the one hand, under both Python2 and Python3 the subprocess output
      is a bytestring. On the other, some internals Sphinx Graphviz module
      expects dot code to have string representation, which is NOT the same
      as bytestrings under Python3. As a result, when running under Python3
      the Graphviz module fails to render dot code due to being unable to
      concatenate a string with a bytestring.
      
      Now subprocess output is decoded to string, using the default encoding
      of the given Python version. This makes the Graphviz module happy.
      844ceb20
    • Marek Szuba's avatar
      docs/xhive: switch to python3-style print and non-binary tempfile output · df61b4a3
      Marek Szuba authored
      Seems to work fine under both Python2 and Python3 now. Switching to
      non-binary mode was needed due to Python3 strings being Unicode by
      default.
      df61b4a3
  6. 04 Jan, 2019 1 commit
  7. 05 Dec, 2018 1 commit
  8. 06 Mar, 2018 1 commit
  9. 24 Aug, 2017 2 commits
  10. 23 Aug, 2017 1 commit
  11. 18 Aug, 2017 2 commits