Commits · e2d4a4d017ba18b859fb9419de4a09a7cf44f5f7 · ensembl-gh-mirror / ensembl-hive

This project is mirrored from https://:*****@github.com/Ensembl/ensembl-hive.git. Pull mirroring updated Feb 01, 2023.

22 Nov, 2016 1 commit
- bugfix: default_insertion_method becomes INSERT (INSERT_IGNORE for Jobs only)... · e2d4a4d0
  Leo Gordon authored Nov 22, 2016
```
bugfix: default_insertion_method becomes INSERT (INSERT_IGNORE for Jobs only) to avoid masking FK collisions in mysql 5.6
```
  e2d4a4d0
21 Nov, 2016 1 commit
- Added a rule at the PostgreSQL level to mimic INSERT IGNORE · 715ddfb7
  Matthieu Muffato authored May 11, 2016
  
  715ddfb7
31 Oct, 2016 1 commit
- bugfix: Postgre renames "COUNT(*)" to "count" · fd98441f
  Matthieu Muffato authored Oct 31, 2016
  
  fd98441f
06 Jul, 2016 6 commits
- Copyright update. We are now EBI o/ · 94978072
  Matthieu Muffato authored Jul 06, 2016
  
  94978072
- Copyright update. We are now EBI o/ · acdb12c0
  Matthieu Muffato authored Jul 06, 2016
  
  acdb12c0
- Copyright update. We are now EBI o/ · acd45876
  Matthieu Muffato authored Jul 06, 2016
  
  acd45876
- Copyright update. We are now EBI o/ · 5dfede22
  Matthieu Muffato authored Jul 06, 2016
  
  5dfede22
- Copyright update. We are now EBI o/ · 506adc4b
  Matthieu Muffato authored Jul 06, 2016
  
  506adc4b
- Copyright update. We are now EBI o/ · 966f9b31
  Matthieu Muffato authored Jul 06, 2016
  
  966f9b31
16 Jun, 2016 1 commit
- moved the specifics of fetching an AnalysisStats object out of BaseAdaptor · e59dae96
  Leo Gordon authored Jun 16, 2016
  
  e59dae96
12 May, 2016 1 commit
- a common method to allow filtering with undefined values · beccbdf8
  Leo Gordon authored May 12, 2016
  
  beccbdf8
14 Mar, 2016 1 commit
- bugfix: make sure we do not insert 0000-00-00 on topping up a running database... · 29434b3e
  Leo Gordon authored Mar 14, 2016
```
bugfix: make sure we do not insert 0000-00-00 on topping up a running database (a bug for strict MySQL 5.6)
```
  29434b3e
04 Feb, 2016 1 commit

bugfix: when looking for a job by content make sure we also check... · 50911cca

Leo Gordon authored Feb 04, 2016

bugfix: when looking for a job by content make sure we also check analysis_data - thanks to Michael Nuhn for reporting

50911cca

29 Jan, 2016 1 commit
- Updated the copyright year --> 2016 · 758dbbd1
  Leo Gordon authored Jan 29, 2016
  
  758dbbd1
24 Nov, 2015 1 commit
- All errors in BaseAdaptor are thrown to speed up debugging · c236ba1c
  Leo Gordon authored Nov 23, 2015
  
  c236ba1c
30 Oct, 2015 1 commit
- bugfix: do not crash on empty dataflow list · 69029f64
  Leo Gordon authored Oct 30, 2015
  
  69029f64
29 Oct, 2015 1 commit
- cosmetic: commented-out warning moved and extended · 9841f0b7
  Leo Gordon authored Oct 29, 2015
  
  9841f0b7
17 Aug, 2015 1 commit
- bugfix: the regular expression didn't work when both sides of HASHED_FROM were in use · c9c8a082
  Matthieu Muffato authored Aug 17, 2015
  
  c9c8a082
10 Aug, 2015 1 commit
- create multiple instances of NakedTableAdaptor and cache them separately based on their table_name · 3c5a401c
  Leo Gordon authored Aug 10, 2015
  
  3c5a401c
07 May, 2015 1 commit
- Workers attempt to unclaim the rest of the batch to share the load (tail trimming) · 6cbfc423
  Leo Gordon authored Mar 23, 2015
  
  6cbfc423
24 Feb, 2015 1 commit
- bugfix: leave quoting of strings to the DBI and switch to using placeholders · d9d2c7c6
  Leo Gordon authored Mar 17, 2014
```
(cherry-picked from version/2.1 branch)
```
  d9d2c7c6
22 Jan, 2015 1 commit
- added autoloaded counting in groups; removed some undefined value warnings · 16738fe3
  Leo Gordon authored Jan 22, 2015
  
  16738fe3
07 Jan, 2015 1 commit
- Updated the copyright to 1999-2015 · 730a6026
  Matthieu Muffato authored Jan 07, 2015
  
  730a6026
23 May, 2014 2 commits
- bugfix: make sure throw() is imported since we are using it · 8679a245
  Leo Gordon authored May 23, 2014
  
  8679a245
- cosmetic: removed a redefinition of variables and put warnings in · 4e7bf429
  Leo Gordon authored May 23, 2014
  
  4e7bf429
13 May, 2014 1 commit
- skip undef values (do not even mention them) when performing store via insert... · 28821307
  Leo Gordon authored May 13, 2014
```
skip undef values (do not even mention them) when performing store via insert (and let SQL layer initialize undefined fields)
```
  28821307
09 Apr, 2014 1 commit

allow BaseAdaptor to store_of_update anonymous hashrefs as well as objects;... · d2e61710

Leo Gordon authored Apr 09, 2014

allow BaseAdaptor to store_of_update anonymous hashrefs as well as objects; rely on Cacheable::unikey() for a unique key; map objectrefs back to their ids

d2e61710

17 Mar, 2014 1 commit
- bugfix: make sure undefined values are mentioned as IS NULL in the filter (thanks, Matthieu!) · 0e9b901d
  Leo Gordon authored Mar 17, 2014
  
  0e9b901d
10 Mar, 2014 1 commit
- store() now only has 1 argument, checks moved into store_or_update_one() · 9e93c173
  Leo Gordon authored Mar 04, 2014
  
  9e93c173
31 Jan, 2014 1 commit
- removed dependency on Core's DBSQL::BaseAdaptor and Storable by introducing... · 9a1f8e72
  Leo Gordon authored Jan 21, 2014
```
removed dependency on Core's DBSQL::BaseAdaptor and Storable by introducing own lightweight Hive::Storable
```
  9a1f8e72
28 Jan, 2014 2 commits
- bugfix: no hope for other DBD drivers to support detection of... · e45199af
  Leo Gordon authored Jan 28, 2014
```
bugfix: no hope for other DBD drivers to support detection of auto-incrementing fields => use our inernal fixed rule
```
  e45199af
- cosmetic: direct the debug output of BaseAdaptor to STDERR instead of STDOUT · 8a48338b
  Leo Gordon authored Jan 28, 2014
  
  8a48338b
24 Jan, 2014 2 commits
- cosmetic: Contact section now contains the sign-up page for the mailing list · bc75073b
  Leo Gordon authored Jan 24, 2014
  
  bc75073b
- Updated copyright years to 1999-2014 · 90a389df
  Leo Gordon authored Jan 24, 2014
  
  90a389df
17 Jan, 2014 1 commit
- implemented input_column_mapping mechanism · 5b379206
  Leo Gordon authored Jan 17, 2014
  
  5b379206
14 Jan, 2014 1 commit
- BaseAdaptor supports transparent fetching from predeclared overflown columns · 978a781b
  Leo Gordon authored Jan 14, 2014
  
  978a781b
19 Dec, 2013 1 commit
- count_all_by... now also supports multicolumn filtering using _AND_ (with examples in t/ ) · e4fbcf73
  Leo Gordon authored Oct 03, 2013
  
  e4fbcf73
09 Dec, 2013 1 commit
- added Apache 2.0 license to all files · 61deb3f4
  Leo Gordon authored Dec 09, 2013
  
  61deb3f4
21 Aug, 2013 1 commit
- cosmetic: reduce the number of synonymous calls to DBI · 7633e335
  Leo Gordon authored Aug 21, 2013
  
  7633e335
26 Jun, 2013 1 commit
- new method(s) to remove objects/rows by a given condition · 2ca3962d
  Leo Gordon authored Jun 25, 2013
  
  2ca3962d