This project is mirrored from https://github.com/Ensembl/ensembl-hive.git. Pull mirroring updated .
  1. 18 Apr, 2005 1 commit
    • Jessica Severin's avatar
      made more Registry friendly by setting -species to be the $dbname · d9eaabe4
      Jessica Severin authored
      thus allowing one to do hybrid URL/Registry code like...
        if($url) {
          $dbc = Bio::EnsEMBL::Hive::URLFactory->fetch($url, 'compara')->dbc;
          $dbname = $dbc->dbname();
        }
        else { $dbc = Bio::EnsEMBL::Registry->get_DBAdaptor($dbname,'compara')->dbc; }
        $fa = Bio::EnsEMBL::Registry->get_adaptor($dbname,'compara','Family');
      d9eaabe4
  2. 22 Mar, 2005 1 commit
  3. 11 Mar, 2005 2 commits
  4. 08 Mar, 2005 2 commits
  5. 04 Mar, 2005 6 commits
  6. 03 Mar, 2005 8 commits
  7. 02 Mar, 2005 3 commits
  8. 23 Feb, 2005 8 commits
  9. 22 Feb, 2005 1 commit
  10. 21 Feb, 2005 1 commit
    • Jessica Severin's avatar
      YAHRF (Yet Another Hive ReFactor).....chapter 1 · 7675c31c
      Jessica Severin authored
      needed to better manage the hive system's load on the database housing all
      the hive related tables (in case the database is overloaded by multiple users).
      Added analysis_stats.sync_lock column (and correspondly in Object and Adaptor)
      Added Queen::safe_synchronize_AnalysisStats method which wraps over the
        synchronize_AnalysisStats method and does various checks and locks to ensure
        that only one worker is trying to do a 'synchronize' on a given analysis at
        any given moment.
      Cleaned up API between Queen/Worker so that worker only talks directly to the
        Queen, rather than getting the underlying database adaptor.
      Added analysis_job columns runtime_msec, query_count to provide more data on
        how the jobs hammer a database (queries/sec).
      7675c31c
  11. 17 Feb, 2005 2 commits
  12. 16 Feb, 2005 5 commits