This project is mirrored from https://github.com/Ensembl/ensembl-hive.git.
Pull mirroring updated .
- 08 Jan, 2021 9 commits
- 16 Dec, 2020 11 commits
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Brandon Walts authored
* version/2.5: This script should be executable remove tweak_pipeline from Test.pm exports as there is no such sub in the 2.5 version of that file" update copyright in cherry-picked peekJob related files Address @muffato's comments for peekJob.pl Change location of peek print to comply with log Updated licence definition Added licence to peekJob.pl Ensure sorted keys for testing peekJob Added unit test for peekJob.pl Add script to peek at job parameters
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Matthieu Muffato authored
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Brandon Walts authored
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Brandon Walts authored
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Carla Cummins authored
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Carla Cummins authored
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Carla Cummins authored
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Carla Cummins authored
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Carla Cummins authored
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Carla Cummins authored
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Carla Cummins authored
peekJob.pl allows us to check which params a job has access to
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- 20 Nov, 2020 4 commits
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Brandon Walts authored
* version/2.5: add simulated output directories to the ascii.t exclude list so that we can keep our simulated lsid output identical to the expected output remove non-ASCII character from fake lsid update exclude list in apache2.t
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Brandon Walts authored
add simulated output directories to the ascii.t exclude list so that we can keep our simulated lsid output identical to the expected output
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Brandon Walts authored
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Brandon Walts authored
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- 12 Nov, 2020 8 commits
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Brandon Walts authored
* version/2.5: Check that LSF detection works as expected bugfix: keep the modified $PATH local to the test, otherwise it will bleed into the other tests Make sure this is a real LSF (or openlava) and exclude Slurm clusters that ship "lsid" Don't use the enhanced mode as it messes up most analysis names
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Brandon Walts authored
* version/2.4: Check that LSF detection works as expected bugfix: keep the modified $PATH local to the test, otherwise it will bleed into the other tests Make sure this is a real LSF (or openlava) and exclude Slurm clusters that ship "lsid" Don't use the enhanced mode as it messes up most analysis names
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Matthieu Muffato authored
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Matthieu Muffato authored
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Matthieu Muffato authored
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Brandon Walts authored
* version/2.3: Don't use the enhanced mode as it messes up most analysis names
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Brandon Walts authored
* version/2.2: Don't use the enhanced mode as it messes up most analysis names
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Matthieu Muffato authored
In enhanced mode, the string "a_b" is displayed as "a" followed by "b" in subscript. Most of our analyses use underscore, so the fix is to disable the enhanced mode.
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- 11 Nov, 2020 8 commits
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Matthieu Muffato authored
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Matthieu Muffato authored
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Matthieu Muffato authored
It handles better Python than doxypy. See https://github.com/Feneric/doxypypy
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Matthieu Muffato authored
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Matthieu Muffato authored
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Matthieu Muffato authored
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Matthieu Muffato authored
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Matthieu Muffato authored
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