Switching to containers and fixing MySQL server issue

Make zip quiet

Switching to another libmysqlclient-dev dependency

Build c code once we are in the install phase

Forgot the relative pathing

Set the path manually to kent src

Some debug. I think it was missing MACHTYPE

More debug

Dir is called kent not jksrc

Compiled files are in lib not inc

Seems we need to compile with -fPIC

Also need this change

Suite running. Some errors still appearing. Need verbose

Making tests work. They are not "fixed" just not erroring

BigBed numeric problem and tabix parsers need the command line tabix binary. This is not right

Missed a semicolon

Mystery failure in BigBed. Switching to is will help

Switching to 1 for strand

Cache the perlbrew directory to speed up subsequent tests

Cache apt

Adding more directories to the cache

Need to path to the shell script

The missing space before ] is important

Travis was slower using apt caching

Need to path to tabix

Only build when the resultant files or dirs are missing