Merge requests · ensembl-gh-mirror / ensembl-io

Merge trains

Fix trackDb absolute url bug.

!7 · created Apr 07, 2015 by Marek Szuba master
- Merged
updated Apr 08, 2015
add non_ref_only option when fetching genotypes

!10 · created Jun 01, 2015 by Marek Szuba master
- Merged
updated Jun 02, 2015
Fixing the test suite and bits of io

!33 · created Mar 23, 2016 by Marek Szuba master
- Closed
- 10
updated Apr 19, 2017
Remove unnecessary dependencies

!24 · created Dec 11, 2015 by Marek Szuba master
- Merged
updated Dec 11, 2015
Keeping core API dependencies to a minimum

!16 · created Aug 18, 2015 by Marek Szuba master
enhancement
- Merged
- 1
updated Aug 20, 2015
correct tabix header function called in PairwiseAdaptor.pm

!47 · created Aug 10, 2016 by Marek Szuba master
- Merged
updated Dec 17, 2018
Patch test databases [release/97]

!85 · created Jun 17, 2019 by Marek Szuba release/97
- Merged
- 4
updated Jun 18, 2019
Add cadd parser

!65 · created Sep 13, 2018 by Marek Szuba master
- Merged
- 2
updated Sep 21, 2018
don't assume diploid

!4 · created Oct 29, 2014 by Marek Szuba variation
- Merged
updated Oct 29, 2014
Experimental/unified design

!53 · created Jun 13, 2017 by Marek Szuba experimental/unified-design
- Closed
- 1
updated Jun 21, 2017
Experimental/rishi genbank

!50 · created Oct 03, 2016 by Marek Szuba experimental/unified-design
- Closed
- 2
updated Dec 15, 2017
Alter genotype field return type

!30 · created Feb 23, 2016 by Marek Szuba release/83
- Merged
updated Feb 23, 2016
Alter genotype field return type

!29 · created Feb 23, 2016 by Marek Szuba master
- Merged
updated Feb 24, 2016
include ftp support for trackhubs

!70 · created Dec 12, 2018 by Marek Szuba release/94
- Merged
- 1
updated Dec 17, 2018
Support for a single fasta sequence from a slice using the unified de…

!46 · created Aug 05, 2016 by Marek Szuba experimental/unified-design
- Closed
- 3
updated Dec 15, 2017
Release-98 version bump

!86 · created Jun 18, 2019 by Marek Szuba master
- Merged
updated Jun 18, 2019
Update URL.pm

!41 · created May 20, 2016 by Marek Szuba master
- Merged
updated May 24, 2016
Genbank has removed GI identifier in the genbank files

!57 · created Apr 04, 2018 by Marek Szuba master
- Merged
- 10
updated May 08, 2018
Backport of PR #80

!81 · created Feb 25, 2019 by Marek Szuba release/96
- Merged
updated Mar 01, 2019
Existing patches to make bigfile fail softly.

!23 · created Dec 03, 2015 by Marek Szuba master
- Merged
updated Dec 03, 2015