This project is mirrored from https://github.com/Ensembl/ensembl-otter.git.
Pull mirroring updated .
- 07 Dec, 2020 2 commits
- 03 Dec, 2020 1 commit
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mira prosovetskaia authored
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- 13 Nov, 2020 6 commits
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Thibaut Hourlier authored
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Thibaut Hourlier authored
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Thibaut Hourlier authored
I'm not sure this modification is really needed. It definitely works and it makes the code cleaner
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Thibaut Hourlier authored
Some species don't have contigs so it's better to use seqlevel as it will return either contig or primary_assembly depending on the database
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Thibaut Hourlier authored
Species without contigs need the INSDC synonym to be present to return the correct data for the XML file Use INSDC instead of insdc as sqlite is case sensitive
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Thibaut Hourlier authored
If we use the locus cache to fetch the new locus before it was added to the cache we will modify the old one and ZMap will not be able to delete the correct object in the display
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- 19 Oct, 2020 5 commits
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s-mm authored
Changed authentication process to use prod authentication server
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s-mm authored
Do not check pipeline table if primary_assembly
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s-mm authored
Module to fetch data from a compara database
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s-mm authored
Added herring and herring test species
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Shamika Mohanan authored
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- 14 Oct, 2020 1 commit
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Shamika Mohanan authored
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- 09 Oct, 2020 4 commits
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Thibaut Hourlier authored
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Thibaut Hourlier authored
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s-mm authored
Temporary changes to the authentication process. Merging it as it does not affect anything serious.
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Shamika Mohanan authored
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- 15 Sep, 2020 3 commits
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s-mm authored
Added mouse test species details
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s-mm authored
Store evidences fix
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Shamika Mohanan authored
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- 07 Sep, 2020 1 commit
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Shamika Mohanan authored
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- 21 Aug, 2020 2 commits
- 20 Aug, 2020 2 commits
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Mira Sycheva authored
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Mira Sycheva authored
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- 19 Aug, 2020 1 commit
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Thibaut Hourlier authored
The new_dissociated_copy method in Exon and Transcript was not copying the supporting evidence. So the supporting evidences would be lost each time the method is used
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- 14 Aug, 2020 1 commit
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Thibaut Hourlier authored
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- 21 Jul, 2020 1 commit
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Mira Sycheva authored
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- 20 Jul, 2020 1 commit
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Mira Sycheva authored
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- 06 Jul, 2020 1 commit
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s-mm authored
Changes made for fetchdb to work in ZMap
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- 02 Jul, 2020 1 commit
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Shamika Mohanan authored
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- 26 Jun, 2020 2 commits
- 23 Jun, 2020 2 commits
- 10 Jun, 2020 1 commit
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Mira Sycheva authored
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- 05 Jun, 2020 1 commit
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Mira Sycheva authored
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- 04 Jun, 2020 1 commit
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s-mm authored
Debug output for search
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