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ensembl-gh-mirror
ensembl-test
Commits
73e1582a
Commit
73e1582a
authored
Nov 17, 2020
by
Ameya Chaubal
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103: updated compara testdb
parent
a6e433e6
Pipeline
#110095
failed with stage
in 1 minute and 11 seconds
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modules/t/test-genome-DBs/multi/compara/meta.txt
modules/t/test-genome-DBs/multi/compara/meta.txt
+1
-0
modules/t/test-genome-DBs/multi/compara/table.sql
modules/t/test-genome-DBs/multi/compara/table.sql
+2
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modules/t/test-genome-DBs/multi/compara/meta.txt
View file @
73e1582a
...
...
@@ -66,3 +66,4 @@
81 \N patch patch_101_102_b.sql|enum_other
82 \N patch patch_101_102_c.sql|stn_node_id_bigint
84 \N patch patch_102_103_a.sql|schema_version
85 \N patch patch_102_103_b.sql|clusterset_id_varchar30
modules/t/test-genome-DBs/multi/compara/table.sql
View file @
73e1582a
...
...
@@ -223,7 +223,7 @@ CREATE TABLE `gene_tree_root` (
`root_id`
int
(
10
)
unsigned
NOT
NULL
,
`member_type`
enum
(
'protein'
,
'ncrna'
)
NOT
NULL
,
`tree_type`
enum
(
'clusterset'
,
'supertree'
,
'tree'
)
NOT
NULL
,
`clusterset_id`
varchar
(
2
0
)
NOT
NULL
DEFAULT
'default'
,
`clusterset_id`
varchar
(
3
0
)
NOT
NULL
DEFAULT
'default'
,
`method_link_species_set_id`
int
(
10
)
unsigned
NOT
NULL
,
`species_tree_root_id`
bigint
(
20
)
unsigned
DEFAULT
NULL
,
`gene_align_id`
int
(
10
)
unsigned
DEFAULT
NULL
,
...
...
@@ -429,7 +429,7 @@ CREATE TABLE `meta` (
PRIMARY
KEY
(
`meta_id`
),
UNIQUE
KEY
`species_key_value_idx`
(
`species_id`
,
`meta_key`
,
`meta_value`
(
255
)),
KEY
`species_value_idx`
(
`species_id`
,
`meta_value`
(
255
))
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
8
5
DEFAULT
CHARSET
=
latin1
;
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
8
6
DEFAULT
CHARSET
=
latin1
;
CREATE
TABLE
`method_link`
(
`method_link_id`
int
(
10
)
unsigned
NOT
NULL
AUTO_INCREMENT
,
...
...
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