patch_96_97_d.sql 1.21 KB
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-- Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
-- Copyright [2016-2019] EMBL-European Bioinformatics Institute
--
-- Licensed under the Apache License, Version 2.0 (the "License");
-- you may not use this file except in compliance with the License.
-- You may obtain a copy of the License at
--
--      http://www.apache.org/licenses/LICENSE-2.0
--
-- Unless required by applicable law or agreed to in writing, software
-- distributed under the License is distributed on an "AS IS" BASIS,
-- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-- See the License for the specific language governing permissions and
-- limitations under the License.

# patch_96_97_d.sql
#
# Title: Add RNAProduct as accepted ensembl_object_type for object_xref
#
# Description:
#   This is so that Ensembl can fully support mature RNA products, e.g. microRNA

ALTER TABLE object_xref MODIFY COLUMN ensembl_object_type enum('RawContig', 'Transcript', 'Gene', 'Translation', 'Operon', 'OperonTranscript', 'Marker', 'RNAProduct') NOT NULL;

# patch identifier
INSERT INTO meta (species_id, meta_key, meta_value)
  VALUES (NULL, 'patch', 'patch_96_97_d.sql|add_object_type_rnaproduct');