From 00470a19b0d567fdef2eac12396cb7a11920f350 Mon Sep 17 00:00:00 2001
From: Monika Komorowska <mk8@sanger.ac.uk>
Date: Thu, 6 Oct 2011 11:38:44 +0000
Subject: [PATCH] updated ignore hash
---
misc-scripts/xref_mapping/XrefMapper/drosophila.pm | 8 +-------
1 file changed, 1 insertion(+), 7 deletions(-)
diff --git a/misc-scripts/xref_mapping/XrefMapper/drosophila.pm b/misc-scripts/xref_mapping/XrefMapper/drosophila.pm
index 450d865263..a667360c30 100644
--- a/misc-scripts/xref_mapping/XrefMapper/drosophila.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/drosophila.pm
@@ -51,13 +51,7 @@ sub transcript_display_xref_sources {
print "Get FlyBase Transcript display_xrefs_sources with fullmode=$fullmode\n" if ($self->verbose);
- my %ignore;
- if(!$fullmode){
- $ignore{"EntrezGene"}= 'FROM:RefSeq_[pd][en][pa].*_predicted';
- }
- else{
- $ignore{"EntrezGene"} = 'select ox.object_xref_id from object_xref ox, dependent_xref dx, source s1, xref x1, source s2, xref x2 where ox.object_xref_id = dx.object_xref_id and dx.dependent_xref_id = x1.xref_id and x1.source_id = s1.source_id and s1.name = "EntrezGene" and x2.xref_id = dx.master_xref_id and x2.source_id = s2.source_id and (s2.name like "Refseq_dna_predicted" or s2.name like "RefSeq_peptide_predicted") and ox.ox_status = "DUMP_OUT"';
- }
+ my %ignore;
return [\@list,\%ignore];
--
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