From 02101f1c8af427dfa4d72e31c562e893ce78de81 Mon Sep 17 00:00:00 2001
From: Ian Longden <ianl@sanger.ac.uk>
Date: Fri, 24 Jun 2011 12:48:28 +0000
Subject: [PATCH] bug fix for uniprot genename having same display and
accession
---
misc-scripts/xref_mapping/XrefParser/UniProtParser.pm | 4 +++-
1 file changed, 3 insertions(+), 1 deletion(-)
diff --git a/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm b/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm
index 1dbf46b3b8..d3e4b95e95 100644
--- a/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm
+++ b/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm
@@ -417,7 +417,9 @@ sub create_xrefs {
my $syn = $1;
$syn =~ s/\s+//g;
@syn= split(/,/,$syn);
- push @{$depe{SYNONYMS}}, @syn;
+ print "SYN:".join("\t",@syn)."\n";
+ push (@{$depe{"SYNONYMS"}}, @syn);
+# push (@{$xref->{"SYNONYMS"} }, $accessions[$a]);
}
}
}
--
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