diff --git a/misc-scripts/attribute_types/attrib_type.txt b/misc-scripts/attribute_types/attrib_type.txt index be6aa178040ad3ffce595ac00eb6fdc15ce6d71e..7a82e7f6758ab80d29219536dde5ebe16b95a6d4 100644 --- a/misc-scripts/attribute_types/attrib_type.txt +++ b/misc-scripts/attribute_types/attrib_type.txt @@ -183,8 +183,24 @@ 93 alt_embl_acc Alt EMBL acc 94 alt_org Alt org -# anacode attribs added by ml6 29/11/06 +# anacode attribs added by ml6 29/11/06 - seen in yeast but not others 95 intl_clone_name International Clone Name 96 embl_version EMBL Version 97 chr Chromosome Name Chromosome Name Contained in the Assembly 98 equiv_asm Equivalent EnsEMBL assembly For full chromosomes made from NCBI AGPs +99 GeneNo_ncRNA ncRNA Gene Count Number of ncRNA Genes + +# Ig segment gene counts for seq regions stats script ds5 2/2/07 +100 GeneNo_IgSeg Ig segment Gene Count Number of Ig segment Genes + +# cat missing atts +109 HitSimilarity hit similarity percentage id to parent transcripts +110 HitCoverage hit coverage coverage of parent transcripts +111 PropNonGap proportion non gap proportion non gap +112 NumStops number of stops +113 GapExons gap exons number of gap exons +114 SourceTran source transcript source transcript +115 EndNotFound end not found end not found +116 StartNotFound start not found start not found + +117 Frameshift Fra Frameshift modelled as intron \ No newline at end of file