From 0ff720618b1015a15d3f1665809843a43e492268 Mon Sep 17 00:00:00 2001
From: Will Spooner <whs@sanger.ac.uk>
Date: Wed, 24 Mar 2004 12:27:34 +0000
Subject: [PATCH] s/coord_systems/CoordSystems/g in docs
---
modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm
index d823bd0963..11f9ed7944 100644
--- a/modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm
+++ b/modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm
@@ -117,8 +117,8 @@ sub new {
The ordering of the coodinate systems is arbitrary.
The following two statements are equivalent:
- $mapper = $asma->fetch_by_coord_systems($cs1,$cs2);
- $mapper = $asma->fetch_by_coord_systems($cs2,$cs1);
+ $mapper = $asma->fetch_by_CoordSystems($cs1,$cs2);
+ $mapper = $asma->fetch_by_CoordSystems($cs2,$cs1);
Returntype : Bio::EnsEMBL::AssemblyMapper
Exceptions : none
Caller : general
@@ -960,7 +960,7 @@ sub register_contig {
sub fetch_by_type{
my ($self,$type) = @_;
- deprecate('Use fetch_by_coord_systems instead');
+ deprecate('Use fetch_by_CoordSystems instead');
#assume that what the user wanted was a mapper between the sequence coord
#level and the top coord level
--
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