diff --git a/modules/Bio/EnsEMBL/AlignStrainSlice.pm b/modules/Bio/EnsEMBL/AlignStrainSlice.pm index 7e43982bd933fe5927d0439c86c2dbdd7b23746a..150ae12fac4b09ca6de300287e6ddec20b9afc44 100644 --- a/modules/Bio/EnsEMBL/AlignStrainSlice.pm +++ b/modules/Bio/EnsEMBL/AlignStrainSlice.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Analysis.pm b/modules/Bio/EnsEMBL/Analysis.pm index 78f556658fc308916c30ad286d1cc6e9c726bb3e..8760a5da0026a9fbdf214402c5b2e763d2f42d68 100755 --- a/modules/Bio/EnsEMBL/Analysis.pm +++ b/modules/Bio/EnsEMBL/Analysis.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Analysis/PairAlign.pm b/modules/Bio/EnsEMBL/Analysis/PairAlign.pm index 36c627e01eea621d71ae8407d93c1e6a27e9b456..3dc696ad08b8247607243ed8c25cf9774bf6f888 100755 --- a/modules/Bio/EnsEMBL/Analysis/PairAlign.pm +++ b/modules/Bio/EnsEMBL/Analysis/PairAlign.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Analysis/Programs.pm b/modules/Bio/EnsEMBL/Analysis/Programs.pm index 103499f9447ea7138d1e7ea30e692f2500433702..439b9075dfeb3af73919496cd67cb3b4bc76cb3b 100755 --- a/modules/Bio/EnsEMBL/Analysis/Programs.pm +++ b/modules/Bio/EnsEMBL/Analysis/Programs.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/ApiVersion.pm b/modules/Bio/EnsEMBL/ApiVersion.pm index e5e812a01aab8164e1d6f1b0148d72ca568477df..9f8e5592b94033f2227c7931908581ca34f52928 100644 --- a/modules/Bio/EnsEMBL/ApiVersion.pm +++ b/modules/Bio/EnsEMBL/ApiVersion.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/ArchiveStableId.pm b/modules/Bio/EnsEMBL/ArchiveStableId.pm index f0e0bb1eb447758d07492d8df8444e3bc984e8a6..a97a77e43b8872d432effa975cbc1498402da13f 100644 --- a/modules/Bio/EnsEMBL/ArchiveStableId.pm +++ b/modules/Bio/EnsEMBL/ArchiveStableId.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/AssemblyExceptionFeature.pm b/modules/Bio/EnsEMBL/AssemblyExceptionFeature.pm index f727cb8b81e30b70c10dc973ecfddc7998ad2e2b..76e4dfd4706d01ef9eb4afe75bc850828bc6fd07 100644 --- a/modules/Bio/EnsEMBL/AssemblyExceptionFeature.pm +++ b/modules/Bio/EnsEMBL/AssemblyExceptionFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/AssemblyMapper.pm b/modules/Bio/EnsEMBL/AssemblyMapper.pm index d9bcacfb201736c967c15ee52c138815088157a3..5bc207740423f899e3194d712309604e1bfaac82 100644 --- a/modules/Bio/EnsEMBL/AssemblyMapper.pm +++ b/modules/Bio/EnsEMBL/AssemblyMapper.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Attribute.pm b/modules/Bio/EnsEMBL/Attribute.pm index 937da10b6f902a4a2242920798258ac68a301919..ea25276dce9e52eba0f8e0539d74c4c6c7b8155e 100644 --- a/modules/Bio/EnsEMBL/Attribute.pm +++ b/modules/Bio/EnsEMBL/Attribute.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/BaseAlignFeature.pm b/modules/Bio/EnsEMBL/BaseAlignFeature.pm index 3776ba57197f09ac55f34e3bcdda1fe100d03abc..9bbff3334980b8f0b1956c75024471fd08d936a1 100644 --- a/modules/Bio/EnsEMBL/BaseAlignFeature.pm +++ b/modules/Bio/EnsEMBL/BaseAlignFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/ChainedAssemblyMapper.pm b/modules/Bio/EnsEMBL/ChainedAssemblyMapper.pm index 11517d2675c49e318d88ad39fc84b740006522b2..fcbba4ae142bad3afebcef9f85a70cad82651eb6 100644 --- a/modules/Bio/EnsEMBL/ChainedAssemblyMapper.pm +++ b/modules/Bio/EnsEMBL/ChainedAssemblyMapper.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/CircularSlice.pm b/modules/Bio/EnsEMBL/CircularSlice.pm index f4167499618814d2455443faed4289269f264bec..eb2624eec0b2325c7d67614feae40141a10c3f90 100644 --- a/modules/Bio/EnsEMBL/CircularSlice.pm +++ b/modules/Bio/EnsEMBL/CircularSlice.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/CoordSystem.pm b/modules/Bio/EnsEMBL/CoordSystem.pm index 939344449bbd9a3710926820f3ae0434735f658c..6d10fd06073341f87b0318c9791786781587341f 100644 --- a/modules/Bio/EnsEMBL/CoordSystem.pm +++ b/modules/Bio/EnsEMBL/CoordSystem.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DB/ExternalFeatureFactoryI.pm b/modules/Bio/EnsEMBL/DB/ExternalFeatureFactoryI.pm index d7d8030acd02b7322ca752ec87ffc9913721c7a5..e13d5f6ac4121e2e2e33acc923ea0308c2fdab39 100755 --- a/modules/Bio/EnsEMBL/DB/ExternalFeatureFactoryI.pm +++ b/modules/Bio/EnsEMBL/DB/ExternalFeatureFactoryI.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBEntry.pm b/modules/Bio/EnsEMBL/DBEntry.pm index 6d2e7cc14bd73620ac6f60512da0f07f4c7ba771..62af6ad750e446aa04366b63f582f484c3421f2f 100644 --- a/modules/Bio/EnsEMBL/DBEntry.pm +++ b/modules/Bio/EnsEMBL/DBEntry.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBLoader.pm b/modules/Bio/EnsEMBL/DBLoader.pm index 22097f242cd877fbf7c54c4dd58efbd580a931b9..5e7809d923908872e9a1cd0bc91e97cb709db532 100755 --- a/modules/Bio/EnsEMBL/DBLoader.pm +++ b/modules/Bio/EnsEMBL/DBLoader.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/AnalysisAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/AnalysisAdaptor.pm index bc9b2ac5e096e5b6416c4365d45968e88ea49e60..afcf11200adc21418826ab7289cf400677a60ff1 100755 --- a/modules/Bio/EnsEMBL/DBSQL/AnalysisAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/AnalysisAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/ArchiveStableIdAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/ArchiveStableIdAdaptor.pm index e904dcac7513a9103f305c9cfb04b2b42c300143..cb87a0c62b5c55214e9b3fedafd59d22fd3a3c96 100644 --- a/modules/Bio/EnsEMBL/DBSQL/ArchiveStableIdAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/ArchiveStableIdAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/AssemblyExceptionFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/AssemblyExceptionFeatureAdaptor.pm index eef476b26919263b8c8df3880c7fce5aadf7399e..e9fe533144cb5ecf8216654933fd3fdaa506451e 100644 --- a/modules/Bio/EnsEMBL/DBSQL/AssemblyExceptionFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/AssemblyExceptionFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm index f229ca11176ab0919c184803779fa993fd693400..5b365d45fcd7cb590243508622a1274d3f1b1c73 100644 --- a/modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/AssemblySliceAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/AssemblySliceAdaptor.pm index 8da6d61fd580bb4cbfe01e2959feccc91e736f78..daf62099169495140c2f8b1ebbf409fd272ea2b3 100644 --- a/modules/Bio/EnsEMBL/DBSQL/AssemblySliceAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/AssemblySliceAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/AttributeAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/AttributeAdaptor.pm index f82ad1224953be9f07c59e98b91381884cbb552f..b08db99fb3baedbd6b6a3778fcc239b5676a9d78 100644 --- a/modules/Bio/EnsEMBL/DBSQL/AttributeAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/AttributeAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/BaseAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/BaseAdaptor.pm index a94476d93b633299434a1c583f65d14568968e4f..6baac4b2de2fa0394b1b23693a949c7d91149d91 100755 --- a/modules/Bio/EnsEMBL/DBSQL/BaseAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/BaseAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/BaseAlignFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/BaseAlignFeatureAdaptor.pm index b1708fe363d3ecdb4273c165cb4f45aa12efa1c5..589ce955f7c54fdd256cdc0d0050e236c25ad6e2 100644 --- a/modules/Bio/EnsEMBL/DBSQL/BaseAlignFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/BaseAlignFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm index 1c9c689b0379bc02393724e57e99f5bf97f08142..aef74058f8c8498233c183b1d10ba30c1deb8d49 100644 --- a/modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/BaseMetaContainer.pm b/modules/Bio/EnsEMBL/DBSQL/BaseMetaContainer.pm index 4c88461c03bc1e50f66969c4b3b3527dab9ce802..18a1aa89e2ab57bfee9f2f5f129280b12255c0a3 100644 --- a/modules/Bio/EnsEMBL/DBSQL/BaseMetaContainer.pm +++ b/modules/Bio/EnsEMBL/DBSQL/BaseMetaContainer.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/CompressedSequenceAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/CompressedSequenceAdaptor.pm index b8b9c1c1c8539ba1e409bad65eb20ac8fd11abfd..e29903fc7dad4874883f92d0e08b2f3d49f7bd92 100644 --- a/modules/Bio/EnsEMBL/DBSQL/CompressedSequenceAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/CompressedSequenceAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/CoordSystemAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/CoordSystemAdaptor.pm index 596dee396a6e1931047f28dee7d89a884d141922..7ad08ba658dedf6183cc5d6eab19f210ceb45ce1 100644 --- a/modules/Bio/EnsEMBL/DBSQL/CoordSystemAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/CoordSystemAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm index 9a816cabc63dc35f7659226337981b1bb5628d9e..93a76fc2532c6f01c06a36f48a74e8e1a328c192 100755 --- a/modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm b/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm index 9d3ded2a376219cfcb341cba5631d0e8da50c115..869f02cde964a34a091af84ff6cf4edbc6851c94 100644 --- a/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm +++ b/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/DBEntryAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/DBEntryAdaptor.pm index c10709157c3de70df5cf4b83e851a471e35c1cbb..94561913f510af48b02fd0e7b7c60ceb31a75075 100644 --- a/modules/Bio/EnsEMBL/DBSQL/DBEntryAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/DBEntryAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/DensityFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/DensityFeatureAdaptor.pm index e5b1b1109c5a619c1274839a31eb22d00d59ac34..bb9fb65797fcdf66aa29f36fad817459df1f60a2 100644 --- a/modules/Bio/EnsEMBL/DBSQL/DensityFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/DensityFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/DensityTypeAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/DensityTypeAdaptor.pm index 621d3d2293ca9566cfbc09f8ff09fedc5c2a4f16..633dd9d1e77a5aa93b6919de9977b78571c76324 100644 --- a/modules/Bio/EnsEMBL/DBSQL/DensityTypeAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/DensityTypeAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/DnaAlignFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/DnaAlignFeatureAdaptor.pm index 065053cb38f3e036ea26b69fa80be6669c4d46af..02fd950703bd2134f50697b958d0842a10f50936 100644 --- a/modules/Bio/EnsEMBL/DBSQL/DnaAlignFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/DnaAlignFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm index c4ab8fbb38044a278fbd80fc9f0c60a9e650b69c..0572f9436488c1990838999ba961ab3e1d66df39 100644 --- a/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/GOTermAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/GOTermAdaptor.pm index 9bf5a1aa0dd51b21c4bc62bf5208d6b581ad5a53..f757ddc72addbb6936a9d172a9c4a50d571ce0ee 100644 --- a/modules/Bio/EnsEMBL/DBSQL/GOTermAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/GOTermAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm index b17bfdf1e978648eb6b3f17eed791801ce2ddea5..44e5b7be84c2cb2920625313d63ded9e5c69df86 100644 --- a/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/KaryotypeBandAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/KaryotypeBandAdaptor.pm index 0d97ce0546c5a2c144e00ca4411868bb9992fc27..b8632688edf20b2314997ac5b61c566512d85fa9 100644 --- a/modules/Bio/EnsEMBL/DBSQL/KaryotypeBandAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/KaryotypeBandAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/MergedAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/MergedAdaptor.pm index b94f41c5a53bc76949a289d276b074107f9b061a..bc1b568d98770499a0a47d4e662d914084ff3a2a 100644 --- a/modules/Bio/EnsEMBL/DBSQL/MergedAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/MergedAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/MetaContainer.pm b/modules/Bio/EnsEMBL/DBSQL/MetaContainer.pm index 2ea98350dce61465808e1af9eb385ee944de3b55..594b8f245d5f7f3fbccf80825bcda8d835c65a3e 100644 --- a/modules/Bio/EnsEMBL/DBSQL/MetaContainer.pm +++ b/modules/Bio/EnsEMBL/DBSQL/MetaContainer.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/MetaCoordContainer.pm b/modules/Bio/EnsEMBL/DBSQL/MetaCoordContainer.pm index 8b9b4b8f595d47007f3a06c2be69f3e02740685d..d5333a4098eb470ab4023c6094281a033ba0a1e8 100644 --- a/modules/Bio/EnsEMBL/DBSQL/MetaCoordContainer.pm +++ b/modules/Bio/EnsEMBL/DBSQL/MetaCoordContainer.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/MiscFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/MiscFeatureAdaptor.pm index 337d6a7239c7d93c9aa106078718a05060bd0470..35d3c721b2097c87e799d78e421b9ebfc4afad6b 100644 --- a/modules/Bio/EnsEMBL/DBSQL/MiscFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/MiscFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/MiscSetAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/MiscSetAdaptor.pm index 09ce64a87f4a032263deeaa7f90a33b6db40110b..04e8f0de7dbd7fdbeedeb04f9fda6a4c41fc87e6 100644 --- a/modules/Bio/EnsEMBL/DBSQL/MiscSetAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/MiscSetAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/OntologyDBAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/OntologyDBAdaptor.pm index 7fe6279e904a7c346d32bf0d0397909dd575987d..c726a5c6c523c9d44a43844368558d49e8a46a2f 100644 --- a/modules/Bio/EnsEMBL/DBSQL/OntologyDBAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/OntologyDBAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm index 87189b2768bf451d9f260c514ae82d3927e3f2eb..c31029d7f7f958131d297e66ded02a6056204cbd 100644 --- a/modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm @@ -1,7 +1,7 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/PredictionExonAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/PredictionExonAdaptor.pm index 3e307760a2088eb7b9bd69759f1f0c436cf2e4f0..c8109a84821b7683f6645f609709e03d76ddbbd8 100644 --- a/modules/Bio/EnsEMBL/DBSQL/PredictionExonAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/PredictionExonAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/PredictionTranscriptAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/PredictionTranscriptAdaptor.pm index 59cd535dcb6a29045f22b241f8f99c678188d037..0aeb9f583879987946fe81a131d6012054660109 100644 --- a/modules/Bio/EnsEMBL/DBSQL/PredictionTranscriptAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/PredictionTranscriptAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/ProteinAlignFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/ProteinAlignFeatureAdaptor.pm index b00b7c6290014a625b1ae662db70da7f9a5e70f2..e734d2eac75799cc36b89d42313e4858d17d9eca 100644 --- a/modules/Bio/EnsEMBL/DBSQL/ProteinAlignFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/ProteinAlignFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/ProteinFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/ProteinFeatureAdaptor.pm index b9f8dd89fe974739e98d1ca4be4b4474d5a66e76..073dad63b241988bc1ea6bd94f5953f58a8f7c59 100755 --- a/modules/Bio/EnsEMBL/DBSQL/ProteinFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/ProteinFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/ProxySNPAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/ProxySNPAdaptor.pm index ad7837c171d5c021e4272763fb558a61b1281fa8..36abf12ef00feef458e8fbb6f97c4b840bde3ac1 100644 --- a/modules/Bio/EnsEMBL/DBSQL/ProxySNPAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/ProxySNPAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/RepeatConsensusAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/RepeatConsensusAdaptor.pm index 734b0c983dc3141df62755684dd678a0c2198dd7..bd5b7aed4cc7a420b4d16afd29d3563b4cb708a6 100644 --- a/modules/Bio/EnsEMBL/DBSQL/RepeatConsensusAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/RepeatConsensusAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/RepeatFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/RepeatFeatureAdaptor.pm index 6ed5ee45963c6d62447fb7f33bcf28fe0927f167..3dd5c9fc9f95017bbd08ae5bb122d9e3827b65f0 100644 --- a/modules/Bio/EnsEMBL/DBSQL/RepeatFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/RepeatFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/SOTermAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/SOTermAdaptor.pm index eea4f04de7ab177cba61fced4ecc9bd97a1bbd43..0e6cb55eeaaa4d2cb15e89790fc96cc8f63c7b88 100644 --- a/modules/Bio/EnsEMBL/DBSQL/SOTermAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/SOTermAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/SeqRegionSynonymAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/SeqRegionSynonymAdaptor.pm index ff0d6294402021056698bcdacf1fc20f7d27cdfa..5e2bde4468b85d28fa2dd301d913c90e332ccc61 100644 --- a/modules/Bio/EnsEMBL/DBSQL/SeqRegionSynonymAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/SeqRegionSynonymAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/SequenceAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/SequenceAdaptor.pm index 9dda5b63ec3ad7ef9d5ebb90904382f256b68a35..d5bbfa4437d5d991034f7607fe1b5c06db9b123e 100644 --- a/modules/Bio/EnsEMBL/DBSQL/SequenceAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/SequenceAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/SimpleFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/SimpleFeatureAdaptor.pm index 60d7c11f53dff1b977c707d8019391a62e5feccc..1d9bd8a80f3041ea30982475b23b776e5c9a695b 100644 --- a/modules/Bio/EnsEMBL/DBSQL/SimpleFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/SimpleFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm index f57ace169e59f2ed8b7ffad664a80a4f73db29ab..13fd3e7095108bcd3cddf3e8418dee89785202ae 100644 --- a/modules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/SplicingEventAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/SplicingEventAdaptor.pm index 9cb54624b1d6d218368500c1b87e9f37760954c5..906751b9b14472b284aeebb0e350e746c9dba4ef 100644 --- a/modules/Bio/EnsEMBL/DBSQL/SplicingEventAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/SplicingEventAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/SplicingEventFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/SplicingEventFeatureAdaptor.pm index 996fbb15d24a59569a152cd77692873064c7712e..9c97276bcd3e74aa48d914e33af185517eb5e68e 100644 --- a/modules/Bio/EnsEMBL/DBSQL/SplicingEventFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/SplicingEventFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/SplicingTranscriptPairAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/SplicingTranscriptPairAdaptor.pm index 166e57b9f4b1991c747414f763791c9fb78bf1e6..6e6b68b24917573380b6fb901d0ca99fe6dde90a 100644 --- a/modules/Bio/EnsEMBL/DBSQL/SplicingTranscriptPairAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/SplicingTranscriptPairAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/StatementHandle.pm b/modules/Bio/EnsEMBL/DBSQL/StatementHandle.pm index 4476a4726a66619a135098b696cfafe91883a7b4..4c426b5fb88405b8f2b75aa051d15ff98204b744 100644 --- a/modules/Bio/EnsEMBL/DBSQL/StatementHandle.pm +++ b/modules/Bio/EnsEMBL/DBSQL/StatementHandle.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/SupportingFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/SupportingFeatureAdaptor.pm index a446101ee7482aec781e89aaf3344ba6128cb301..85a4a4286921475bb92ef9f95d4c6098300d0460 100644 --- a/modules/Bio/EnsEMBL/DBSQL/SupportingFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/SupportingFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/TranscriptAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/TranscriptAdaptor.pm index 152ee73fb159af761afddbf26e196fb646364ab6..f90146ecdf26e3eb2d390c364b1f81bf6fed4fb7 100644 --- a/modules/Bio/EnsEMBL/DBSQL/TranscriptAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/TranscriptAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/TranscriptSupportingFeatureAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/TranscriptSupportingFeatureAdaptor.pm index 0556b8b532ea582f1cefcefee3df963799815436..f0f190e351c14d88aa233cd438fb084a93aa37f9 100644 --- a/modules/Bio/EnsEMBL/DBSQL/TranscriptSupportingFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/TranscriptSupportingFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm index c8a00aef916ecd560b9c5d1843df151d66b64dea..9d2540773e0fbcb53edcaad1222dde3eab9d8928 100644 --- a/modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/UnconventionalTranscriptAssociationAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/UnconventionalTranscriptAssociationAdaptor.pm index 7a038d31b932b9a47357b02a2306e21b96bcc19c..689dab1c1d4bd18fe3c6a9cef20a057a41ffe4dd 100644 --- a/modules/Bio/EnsEMBL/DBSQL/UnconventionalTranscriptAssociationAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/UnconventionalTranscriptAssociationAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DBSQL/UnmappedObjectAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/UnmappedObjectAdaptor.pm index 57cc68ae86370e764821b352ef663a96835d7542..6ebdfb67ad153e3bf2d3fcbebb78a784c5339f9a 100644 --- a/modules/Bio/EnsEMBL/DBSQL/UnmappedObjectAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/UnmappedObjectAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DensityFeature.pm b/modules/Bio/EnsEMBL/DensityFeature.pm index f3401239bda31d3a3c25cbda1c8b364b32c3996b..f6461180ede1a840c33e5c280745e661644db02a 100644 --- a/modules/Bio/EnsEMBL/DensityFeature.pm +++ b/modules/Bio/EnsEMBL/DensityFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DensityFeatureSet.pm b/modules/Bio/EnsEMBL/DensityFeatureSet.pm index 738646ff489a968ccb167c439080fdd61c2e6fc4..676fb439f281e805a3bd5e35d14e7a21e7abd0e8 100644 --- a/modules/Bio/EnsEMBL/DensityFeatureSet.pm +++ b/modules/Bio/EnsEMBL/DensityFeatureSet.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DensityPlot/BinValue.pm b/modules/Bio/EnsEMBL/DensityPlot/BinValue.pm index 8ecec5f64f95d4dd30f83928f040da3016d20725..378ddff58e56ec407fa068063a734f4268d1412f 100644 --- a/modules/Bio/EnsEMBL/DensityPlot/BinValue.pm +++ b/modules/Bio/EnsEMBL/DensityPlot/BinValue.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DensityPlot/BinValueSet.pm b/modules/Bio/EnsEMBL/DensityPlot/BinValueSet.pm index 4a59f9de980f763d25e8d231c297933dfe0be260..41ecafdc5f40ba96019fffb397196e3be7e58ac8 100644 --- a/modules/Bio/EnsEMBL/DensityPlot/BinValueSet.pm +++ b/modules/Bio/EnsEMBL/DensityPlot/BinValueSet.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DensityType.pm b/modules/Bio/EnsEMBL/DensityType.pm index ab0b8b39f71acbf44179617f40aa50b6cb19da01..6232f9cedbbfcae893bff1bca360c407a01e54e3 100644 --- a/modules/Bio/EnsEMBL/DensityType.pm +++ b/modules/Bio/EnsEMBL/DensityType.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DnaDnaAlignFeature.pm b/modules/Bio/EnsEMBL/DnaDnaAlignFeature.pm index b35928b26f46ce790e5dfb37e665e79aa7b6d96f..67b7d7cd36547171b80e179046952b869e68e551 100644 --- a/modules/Bio/EnsEMBL/DnaDnaAlignFeature.pm +++ b/modules/Bio/EnsEMBL/DnaDnaAlignFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/DnaPepAlignFeature.pm b/modules/Bio/EnsEMBL/DnaPepAlignFeature.pm index 63d1fae043c4971a3a2477404bc8152f620746ab..cfce608ff35444ab8ba855dc45702a73dbf803c9 100644 --- a/modules/Bio/EnsEMBL/DnaPepAlignFeature.pm +++ b/modules/Bio/EnsEMBL/DnaPepAlignFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Exon.pm b/modules/Bio/EnsEMBL/Exon.pm index c028ef1d7e7d912a90cf2a2f4fbec483bfbf8f19..ea5abbdcd7f94fc8be1e580c0c58ea4a916ed76a 100755 --- a/modules/Bio/EnsEMBL/Exon.pm +++ b/modules/Bio/EnsEMBL/Exon.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/External/BlastAdaptor.pm b/modules/Bio/EnsEMBL/External/BlastAdaptor.pm index 011f99af545c99717e787cdd397a228ab6348e3f..e6e413fa2105d8b44d9a736fe1c1ad0279fede0f 100644 --- a/modules/Bio/EnsEMBL/External/BlastAdaptor.pm +++ b/modules/Bio/EnsEMBL/External/BlastAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/External/ExternalFeatureAdaptor.pm b/modules/Bio/EnsEMBL/External/ExternalFeatureAdaptor.pm index c224f34c00cf58a335a8afbabc30035737a4d8ce..7fdcbfe5b35171b31a418cdb1470cdbb5bea7d15 100644 --- a/modules/Bio/EnsEMBL/External/ExternalFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/External/ExternalFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Feature.pm b/modules/Bio/EnsEMBL/Feature.pm index b355c36b5f11ccc957869e3dfe13a0294cd0f710..e40ec93d7bbc0bcf6330c77d28337e61e3de915d 100644 --- a/modules/Bio/EnsEMBL/Feature.pm +++ b/modules/Bio/EnsEMBL/Feature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/FeaturePair.pm b/modules/Bio/EnsEMBL/FeaturePair.pm index 483ba0961d242ae74f6fd492a2e31d04020b0fa7..ef4fbcfe396da11f6ea9a980315cb8fdd2f3223f 100755 --- a/modules/Bio/EnsEMBL/FeaturePair.pm +++ b/modules/Bio/EnsEMBL/FeaturePair.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Gene.pm b/modules/Bio/EnsEMBL/Gene.pm index a1a151c9317ee119f0a286e01c064ed06933bc9d..6d4999b3784d5b42a2b8d0e4285f8db2ae997ede 100755 --- a/modules/Bio/EnsEMBL/Gene.pm +++ b/modules/Bio/EnsEMBL/Gene.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/Archiver.pm b/modules/Bio/EnsEMBL/IdMapping/Archiver.pm index 3ee77a8c0713e358fb71886aa11f6a0cae41287d..c5827afeb5127a93c27ef7063fd0d7237f67c570 100644 --- a/modules/Bio/EnsEMBL/IdMapping/Archiver.pm +++ b/modules/Bio/EnsEMBL/IdMapping/Archiver.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/BaseObject.pm b/modules/Bio/EnsEMBL/IdMapping/BaseObject.pm index ec3273784a4d0979d5a3459a537c0e07d34771b7..3177940292b3af6fd9138ce8d832b1306f64b721 100644 --- a/modules/Bio/EnsEMBL/IdMapping/BaseObject.pm +++ b/modules/Bio/EnsEMBL/IdMapping/BaseObject.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/Cache.pm b/modules/Bio/EnsEMBL/IdMapping/Cache.pm index 78f22f94ba949da3f270a8ce207da607df7bf97c..d52ff04bdf0c79e4bc0a4b7f45c9ecc68073d504 100644 --- a/modules/Bio/EnsEMBL/IdMapping/Cache.pm +++ b/modules/Bio/EnsEMBL/IdMapping/Cache.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/Entry.pm b/modules/Bio/EnsEMBL/IdMapping/Entry.pm index 368824824b4b90ee3c33b8987fd716dd37010b05..000addfc7802d9d818cc6599e82bd16add64dc23 100644 --- a/modules/Bio/EnsEMBL/IdMapping/Entry.pm +++ b/modules/Bio/EnsEMBL/IdMapping/Entry.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/ExonScoreBuilder.pm b/modules/Bio/EnsEMBL/IdMapping/ExonScoreBuilder.pm index 7118665e73d4a378d9605040fc3d0ba5dc6f9138..91501df89f8303af155e3c753de5443d18d71fc2 100644 --- a/modules/Bio/EnsEMBL/IdMapping/ExonScoreBuilder.pm +++ b/modules/Bio/EnsEMBL/IdMapping/ExonScoreBuilder.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/GeneScoreBuilder.pm b/modules/Bio/EnsEMBL/IdMapping/GeneScoreBuilder.pm index a49bcccf22d52b0dc6dcda1717a849e78037c147..28cefdc1352d375bf02818979777c9029a9dd224 100644 --- a/modules/Bio/EnsEMBL/IdMapping/GeneScoreBuilder.pm +++ b/modules/Bio/EnsEMBL/IdMapping/GeneScoreBuilder.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper.pm b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper.pm index 0f86c984f23a2bd44caa3300af4e4cf02b47c0b2..8516bccd940897b982e8a19d86736b48d93ad5a0 100644 --- a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper.pm +++ b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/BaseMapper.pm b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/BaseMapper.pm index 88f82b2f27d39961b67b614fb6337140f670a4d8..05920e1a44f511912a9fa8906fcf2849cd0dce2f 100644 --- a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/BaseMapper.pm +++ b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/BaseMapper.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblExonGeneric.pm b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblExonGeneric.pm index 8a33c9aaa871d3e880831b7ad98afa354f2b3546..81729deb0d632c29e0ba1727f505632bfc0ebf84 100644 --- a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblExonGeneric.pm +++ b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblExonGeneric.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblGeneGeneric.pm b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblGeneGeneric.pm index e1b7f7e15c9f2288fafc8d31885273ce2d06e0c9..518d6851f6d816a732e84e5a8536079f34e5936f 100644 --- a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblGeneGeneric.pm +++ b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblGeneGeneric.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblTranscriptGeneric.pm b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblTranscriptGeneric.pm index fdb29651b6b53d544e52375ba8f85357ca407c06..32bbc14f5a8fac47486685b0f4903878d69052e5 100644 --- a/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblTranscriptGeneric.pm +++ b/modules/Bio/EnsEMBL/IdMapping/InternalIdMapper/EnsemblTranscriptGeneric.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/MappingList.pm b/modules/Bio/EnsEMBL/IdMapping/MappingList.pm index 7ea89c182fbfc1ee58833af4d75195cdff0f1333..87f94eed193236ee06de4aef4bc3ef297aefe1b5 100644 --- a/modules/Bio/EnsEMBL/IdMapping/MappingList.pm +++ b/modules/Bio/EnsEMBL/IdMapping/MappingList.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/ResultAnalyser.pm b/modules/Bio/EnsEMBL/IdMapping/ResultAnalyser.pm index e1c8b374d28b9789d29b0a2418aca8479e666af9..7c55745d00f033e4bd8419b4d7d96f5884bf1b05 100644 --- a/modules/Bio/EnsEMBL/IdMapping/ResultAnalyser.pm +++ b/modules/Bio/EnsEMBL/IdMapping/ResultAnalyser.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/ScoreBuilder.pm b/modules/Bio/EnsEMBL/IdMapping/ScoreBuilder.pm index b0c6bb544f144bdb00d95e277860485cef05955b..b41349c21b3ef01c5c271baad5db0cda14ddbf88 100644 --- a/modules/Bio/EnsEMBL/IdMapping/ScoreBuilder.pm +++ b/modules/Bio/EnsEMBL/IdMapping/ScoreBuilder.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/ScoredMappingMatrix.pm b/modules/Bio/EnsEMBL/IdMapping/ScoredMappingMatrix.pm index a76ac8a6dd99f912b3c0d9175caeec4d90d2d665..d9eae73919af54dcc17fb8c5ab4a43ba81d9a43f 100644 --- a/modules/Bio/EnsEMBL/IdMapping/ScoredMappingMatrix.pm +++ b/modules/Bio/EnsEMBL/IdMapping/ScoredMappingMatrix.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/Serialisable.pm b/modules/Bio/EnsEMBL/IdMapping/Serialisable.pm index 78df872e010b4294714df252da5e2eddd6c85e1b..0793eb284eddede797cb49d0e9aae953d9a54821 100644 --- a/modules/Bio/EnsEMBL/IdMapping/Serialisable.pm +++ b/modules/Bio/EnsEMBL/IdMapping/Serialisable.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AedesAegypti.pm b/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AedesAegypti.pm index f374f7c5c79bbbb335a6c1345ce5ca22a0606e48..13949ba4951834dca31286ab3480f4f12bf653f2 100644 --- a/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AedesAegypti.pm +++ b/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AedesAegypti.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AnophelesGambiae.pm b/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AnophelesGambiae.pm index 5d0b460e3bfcb3a3ede7743392c88021e9caa419..ca98cbe35f1dbfacc7cb005aebc377932697f5d9 100644 --- a/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AnophelesGambiae.pm +++ b/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AnophelesGambiae.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/EnsemblGeneric.pm b/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/EnsemblGeneric.pm index 1712b3d947fff447723491c4b5315763c790ec45..c0363c862aa08d917d752d82ef11431787cac2d0 100644 --- a/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/EnsemblGeneric.pm +++ b/modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/EnsemblGeneric.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/StableIdMapper.pm b/modules/Bio/EnsEMBL/IdMapping/StableIdMapper.pm index 40c02fd6718ab450312aec953112da576e534961..417be5f5b46be7d8e295d6d1ef60d1cee32f218a 100644 --- a/modules/Bio/EnsEMBL/IdMapping/StableIdMapper.pm +++ b/modules/Bio/EnsEMBL/IdMapping/StableIdMapper.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/SyntenyFramework.pm b/modules/Bio/EnsEMBL/IdMapping/SyntenyFramework.pm index 36c091a111fe2540fde027b64d289443228f6b83..6ac2f43d8fbf3be10d5e34787d78fd30800336a0 100644 --- a/modules/Bio/EnsEMBL/IdMapping/SyntenyFramework.pm +++ b/modules/Bio/EnsEMBL/IdMapping/SyntenyFramework.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/SyntenyRegion.pm b/modules/Bio/EnsEMBL/IdMapping/SyntenyRegion.pm index febc840e5a9349ab8f3e861806b9bc41ac9fbf59..4126a9be7e222ccc9f7d5cdebbd9ce8e01139145 100644 --- a/modules/Bio/EnsEMBL/IdMapping/SyntenyRegion.pm +++ b/modules/Bio/EnsEMBL/IdMapping/SyntenyRegion.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/TinyExon.pm b/modules/Bio/EnsEMBL/IdMapping/TinyExon.pm index abdaca1086bae6f23505855090c09805846ebbd8..17a3d60d8f210142a80e44876c3a2a8a2cd9c9a1 100644 --- a/modules/Bio/EnsEMBL/IdMapping/TinyExon.pm +++ b/modules/Bio/EnsEMBL/IdMapping/TinyExon.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/TinyFeature.pm b/modules/Bio/EnsEMBL/IdMapping/TinyFeature.pm index f6d6974fd497bbac71aac00ea52e9823d03d54cd..1cfb00f2115834e2b07cd155fc9c653ac11d84ae 100644 --- a/modules/Bio/EnsEMBL/IdMapping/TinyFeature.pm +++ b/modules/Bio/EnsEMBL/IdMapping/TinyFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/TinyGene.pm b/modules/Bio/EnsEMBL/IdMapping/TinyGene.pm index f0e5df289bccbff21d36b7394677363c4ec08ae9..765be6ce4a2f63c605aae7cba59bddfab49e86ec 100644 --- a/modules/Bio/EnsEMBL/IdMapping/TinyGene.pm +++ b/modules/Bio/EnsEMBL/IdMapping/TinyGene.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/TinyTranscript.pm b/modules/Bio/EnsEMBL/IdMapping/TinyTranscript.pm index a7e9e8a8c5bb1f4899fafe19e063fac074103afe..e78273b700decfce367cf051c6646daf463251ed 100644 --- a/modules/Bio/EnsEMBL/IdMapping/TinyTranscript.pm +++ b/modules/Bio/EnsEMBL/IdMapping/TinyTranscript.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/TinyTranslation.pm b/modules/Bio/EnsEMBL/IdMapping/TinyTranslation.pm index 75a5ee5ce0c0fca583dfa7639db9e9096875b785..3e5facc1ff122e539dd8036403f97f8638fdf084 100644 --- a/modules/Bio/EnsEMBL/IdMapping/TinyTranslation.pm +++ b/modules/Bio/EnsEMBL/IdMapping/TinyTranslation.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdMapping/TranscriptScoreBuilder.pm b/modules/Bio/EnsEMBL/IdMapping/TranscriptScoreBuilder.pm index 88117bb21207cd25ee032612345d516058028a7c..ac1eb430ff7d10d42990925b8c7f27213fe2ad49 100644 --- a/modules/Bio/EnsEMBL/IdMapping/TranscriptScoreBuilder.pm +++ b/modules/Bio/EnsEMBL/IdMapping/TranscriptScoreBuilder.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IdentityXref.pm b/modules/Bio/EnsEMBL/IdentityXref.pm index 553710ec0a02f31629b8121b8680ee99a16d8c7c..155ac0d92968212751384801ea30d8f13ea0dcf3 100644 --- a/modules/Bio/EnsEMBL/IdentityXref.pm +++ b/modules/Bio/EnsEMBL/IdentityXref.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IndividualSlice.pm b/modules/Bio/EnsEMBL/IndividualSlice.pm index 5f6a60e3aaf99de2a734c1bbf8be1c4455b875a1..a682720a68977e9fce13e498c9c2ff811b430a23 100644 --- a/modules/Bio/EnsEMBL/IndividualSlice.pm +++ b/modules/Bio/EnsEMBL/IndividualSlice.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/IndividualSliceFactory.pm b/modules/Bio/EnsEMBL/IndividualSliceFactory.pm index 4a817d22a0b065d79772e09e548d615c26956f53..6d6ff66306dba4568e405e1a59f5d3bc4d349ee7 100644 --- a/modules/Bio/EnsEMBL/IndividualSliceFactory.pm +++ b/modules/Bio/EnsEMBL/IndividualSliceFactory.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Intron.pm b/modules/Bio/EnsEMBL/Intron.pm index cfc258cb633cfd7948448e6cf99e307c7da61e9a..91f27fd93b772d443329ad2b525682f4335a7692 100644 --- a/modules/Bio/EnsEMBL/Intron.pm +++ b/modules/Bio/EnsEMBL/Intron.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/KaryotypeBand.pm b/modules/Bio/EnsEMBL/KaryotypeBand.pm index ce9f791fb4d2b3c68487ceb498b0a41075d643d3..b7af3c18d1ff71d50fe589d329d7dfd503ff342c 100644 --- a/modules/Bio/EnsEMBL/KaryotypeBand.pm +++ b/modules/Bio/EnsEMBL/KaryotypeBand.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/LRGSlice.pm b/modules/Bio/EnsEMBL/LRGSlice.pm index f63e467d45876a6b1ef3d7a8ffa8bf5fe864f178..03a6caf3ac685d7d63856a2f2e32ee0d5ef25cc0 100644 --- a/modules/Bio/EnsEMBL/LRGSlice.pm +++ b/modules/Bio/EnsEMBL/LRGSlice.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Lite/DBAdaptor.pm b/modules/Bio/EnsEMBL/Lite/DBAdaptor.pm index 0d1325c62028e7f34cbd7e5fa79e3652ac79d7da..99136a9d2c827b590bc61f8c7548df48c2ea31cd 100755 --- a/modules/Bio/EnsEMBL/Lite/DBAdaptor.pm +++ b/modules/Bio/EnsEMBL/Lite/DBAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Lite/SNPAdaptor.pm b/modules/Bio/EnsEMBL/Lite/SNPAdaptor.pm index 253a05c7af7296b0fdcf9c34f9598e72b8d95b71..117e99044853270de0cc5e9ed82d824eedf97b9f 100644 --- a/modules/Bio/EnsEMBL/Lite/SNPAdaptor.pm +++ b/modules/Bio/EnsEMBL/Lite/SNPAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/DBSQL/DitagAdaptor.pm b/modules/Bio/EnsEMBL/Map/DBSQL/DitagAdaptor.pm index e90294ec392ee80616e446f1c1d7c06e21bde4c1..1d7805d31d526e03a88b9abe8a577c30d2528696 100644 --- a/modules/Bio/EnsEMBL/Map/DBSQL/DitagAdaptor.pm +++ b/modules/Bio/EnsEMBL/Map/DBSQL/DitagAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/DBSQL/DitagFeatureAdaptor.pm b/modules/Bio/EnsEMBL/Map/DBSQL/DitagFeatureAdaptor.pm index 69fb8535d745c93baf31c9a2b164d6121052d20f..437079a82fa6e9c75aa6a17945662ee050718cdf 100644 --- a/modules/Bio/EnsEMBL/Map/DBSQL/DitagFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/Map/DBSQL/DitagFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/DBSQL/MarkerAdaptor.pm b/modules/Bio/EnsEMBL/Map/DBSQL/MarkerAdaptor.pm index 5939b9ad359dc18f8a02c69be2117640eecc23c5..212165725c1f813b3578a8c31632326c0b881a48 100644 --- a/modules/Bio/EnsEMBL/Map/DBSQL/MarkerAdaptor.pm +++ b/modules/Bio/EnsEMBL/Map/DBSQL/MarkerAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/DBSQL/MarkerFeatureAdaptor.pm b/modules/Bio/EnsEMBL/Map/DBSQL/MarkerFeatureAdaptor.pm index db48dc153454f9d5a33d6bb4dc8e87dee814c77c..388b26489de3646a7a9e3c3960bc08692e3a74cf 100644 --- a/modules/Bio/EnsEMBL/Map/DBSQL/MarkerFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/Map/DBSQL/MarkerFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/DBSQL/QtlAdaptor.pm b/modules/Bio/EnsEMBL/Map/DBSQL/QtlAdaptor.pm index b86cf2bb9f958ffb02486eacc2330ef1b618da50..56c78e93af5b2ac7ca9836e0cbc32bc6daa4e77d 100644 --- a/modules/Bio/EnsEMBL/Map/DBSQL/QtlAdaptor.pm +++ b/modules/Bio/EnsEMBL/Map/DBSQL/QtlAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/DBSQL/QtlFeatureAdaptor.pm b/modules/Bio/EnsEMBL/Map/DBSQL/QtlFeatureAdaptor.pm index 7c2ae1adda6b1ec8f16ebfe8653ff88429e296fd..b262d4e2057c1024e36ce4b9f4dd020f29a99bb6 100644 --- a/modules/Bio/EnsEMBL/Map/DBSQL/QtlFeatureAdaptor.pm +++ b/modules/Bio/EnsEMBL/Map/DBSQL/QtlFeatureAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/Ditag.pm b/modules/Bio/EnsEMBL/Map/Ditag.pm index addc8f70693de1417c1c392e0445eb48be1803d6..66500069723a86a2a6d8560ccf66771f0a533e3e 100644 --- a/modules/Bio/EnsEMBL/Map/Ditag.pm +++ b/modules/Bio/EnsEMBL/Map/Ditag.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/DitagFeature.pm b/modules/Bio/EnsEMBL/Map/DitagFeature.pm index 733653934e7506d338dc777bbfafbfa8824f37cd..a477967ab30d6253b473e2d0e7cfbfd06e50e76d 100644 --- a/modules/Bio/EnsEMBL/Map/DitagFeature.pm +++ b/modules/Bio/EnsEMBL/Map/DitagFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/MapLocation.pm b/modules/Bio/EnsEMBL/Map/MapLocation.pm index 86d279d68f5e8765d707c662b5e778561167c586..1e94af4a85866d6e35833dd41911a76eda60beb5 100644 --- a/modules/Bio/EnsEMBL/Map/MapLocation.pm +++ b/modules/Bio/EnsEMBL/Map/MapLocation.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/Marker.pm b/modules/Bio/EnsEMBL/Map/Marker.pm index eba279ab4d715e4efa19db5b1493adda748ab973..bb6785f18fbfe2e55d7bee82b659efb8295299f0 100644 --- a/modules/Bio/EnsEMBL/Map/Marker.pm +++ b/modules/Bio/EnsEMBL/Map/Marker.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/MarkerFeature.pm b/modules/Bio/EnsEMBL/Map/MarkerFeature.pm index 2f5f9128555ba7818bea46aacc70d7add710ab40..949987c1716eeb9c3800d976e78ff749bf7b9d0d 100644 --- a/modules/Bio/EnsEMBL/Map/MarkerFeature.pm +++ b/modules/Bio/EnsEMBL/Map/MarkerFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/MarkerSynonym.pm b/modules/Bio/EnsEMBL/Map/MarkerSynonym.pm index 27c82f9e5854902bfdd866882d54b97f6d3eb54a..0c7fca6f8aaf9aef89decfd9e09be5290affd071 100644 --- a/modules/Bio/EnsEMBL/Map/MarkerSynonym.pm +++ b/modules/Bio/EnsEMBL/Map/MarkerSynonym.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/Qtl.pm b/modules/Bio/EnsEMBL/Map/Qtl.pm index 39493adff348536c277287d2d8de1250b7af5c65..1fa2d67725eebc7c7a45cfd512d12635acd6da26 100644 --- a/modules/Bio/EnsEMBL/Map/Qtl.pm +++ b/modules/Bio/EnsEMBL/Map/Qtl.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Map/QtlFeature.pm b/modules/Bio/EnsEMBL/Map/QtlFeature.pm index d109a636217be82eb1795d4f54a6de1bbd5fe900..5697b895318d77b75fc004b04cf7c961e4bbd9d6 100644 --- a/modules/Bio/EnsEMBL/Map/QtlFeature.pm +++ b/modules/Bio/EnsEMBL/Map/QtlFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/MappedSlice.pm b/modules/Bio/EnsEMBL/MappedSlice.pm index 9cd6652ace688a31533e08aa68101a8d19d2ce41..0c570cb266b8842b5a75eafd0f7409b8c0b01ea9 100644 --- a/modules/Bio/EnsEMBL/MappedSlice.pm +++ b/modules/Bio/EnsEMBL/MappedSlice.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/MappedSliceContainer.pm b/modules/Bio/EnsEMBL/MappedSliceContainer.pm index 4a5b895754605fe8a05e2edc7e93e36094d19f8a..562539bf5ef276f9fe222c93abbcde9995e6f92b 100644 --- a/modules/Bio/EnsEMBL/MappedSliceContainer.pm +++ b/modules/Bio/EnsEMBL/MappedSliceContainer.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Mapper.pm b/modules/Bio/EnsEMBL/Mapper.pm index c934618e8eb6210587afa08327697e28885248c1..d5d3a307d24a130e7c6c6b3388cf32c4f17791ce 100644 --- a/modules/Bio/EnsEMBL/Mapper.pm +++ b/modules/Bio/EnsEMBL/Mapper.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Mapper/Coordinate.pm b/modules/Bio/EnsEMBL/Mapper/Coordinate.pm index 24d64c47f4bb1f993660f58c2ef527d9f7335878..36016256cfda2c59c9b074a4347b4fd7acc6bfed 100644 --- a/modules/Bio/EnsEMBL/Mapper/Coordinate.pm +++ b/modules/Bio/EnsEMBL/Mapper/Coordinate.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Mapper/Gap.pm b/modules/Bio/EnsEMBL/Mapper/Gap.pm index 2a8c60773ad34743bfe1af910bd8f6ea2474bc77..b435eac8b2d19ae10bcbd06ca9f08b3e1f2f4e39 100644 --- a/modules/Bio/EnsEMBL/Mapper/Gap.pm +++ b/modules/Bio/EnsEMBL/Mapper/Gap.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Mapper/IndelCoordinate.pm b/modules/Bio/EnsEMBL/Mapper/IndelCoordinate.pm index 45685ed270aa671747ce2905ed446e5ad09f4ac8..2ae2fd014d9100826d6bd3484a566d4701a248de 100644 --- a/modules/Bio/EnsEMBL/Mapper/IndelCoordinate.pm +++ b/modules/Bio/EnsEMBL/Mapper/IndelCoordinate.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Mapper/IndelPair.pm b/modules/Bio/EnsEMBL/Mapper/IndelPair.pm index 73e78738395b543f04fdd3b13f0d3ed4e27a4e82..186ba97a9d52401c084e6b80cf5f2bf5006fac45 100644 --- a/modules/Bio/EnsEMBL/Mapper/IndelPair.pm +++ b/modules/Bio/EnsEMBL/Mapper/IndelPair.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Mapper/Pair.pm b/modules/Bio/EnsEMBL/Mapper/Pair.pm index b47c46550acb246e7694d1f5be6fcb5db1afbbcc..13ac29a6be9136cf7feada4c6fed9e9e191a3868 100644 --- a/modules/Bio/EnsEMBL/Mapper/Pair.pm +++ b/modules/Bio/EnsEMBL/Mapper/Pair.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Mapper/RangeRegistry.pm b/modules/Bio/EnsEMBL/Mapper/RangeRegistry.pm index b53eb490fc226b06b0cfdc57c973bf6bdd4561c7..fd3e6f00117d8f6eda19be0adfba19934d46d58c 100644 --- a/modules/Bio/EnsEMBL/Mapper/RangeRegistry.pm +++ b/modules/Bio/EnsEMBL/Mapper/RangeRegistry.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Mapper/Unit.pm b/modules/Bio/EnsEMBL/Mapper/Unit.pm index 1e455e57edf658508d78bc511866ea6853b2cc12..be5c71a415fd8d5fbbc9f7fa42039ceaa65a3267 100644 --- a/modules/Bio/EnsEMBL/Mapper/Unit.pm +++ b/modules/Bio/EnsEMBL/Mapper/Unit.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/MiscFeature.pm b/modules/Bio/EnsEMBL/MiscFeature.pm index 66aaf1ea3d9d76d6980e78f803dcb1fe3b2db6d1..0835838cf7927d3d7035868576c89062752fd8f2 100644 --- a/modules/Bio/EnsEMBL/MiscFeature.pm +++ b/modules/Bio/EnsEMBL/MiscFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/MiscSet.pm b/modules/Bio/EnsEMBL/MiscSet.pm index 155115005a661058c0f7ed82bbd03a3ac78b89ef..28c949b2b21a908d54de9e8422d9cb183b05ed15 100644 --- a/modules/Bio/EnsEMBL/MiscSet.pm +++ b/modules/Bio/EnsEMBL/MiscSet.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/OntologyTerm.pm b/modules/Bio/EnsEMBL/OntologyTerm.pm index cd782be00d91087103f6b3f7b0a6419aeb5fb633..1e5eed01be16fed7929eaa4afc3cb6576af80284 100644 --- a/modules/Bio/EnsEMBL/OntologyTerm.pm +++ b/modules/Bio/EnsEMBL/OntologyTerm.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/OntologyXref.pm b/modules/Bio/EnsEMBL/OntologyXref.pm index 7c29c433962766493de5e77e8e265328c61f28b8..9f6585da7c6ed8369e235dbcfc43938de49664ad 100644 --- a/modules/Bio/EnsEMBL/OntologyXref.pm +++ b/modules/Bio/EnsEMBL/OntologyXref.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/PepDnaAlignFeature.pm b/modules/Bio/EnsEMBL/PepDnaAlignFeature.pm index fcd7cd294d46c5f27f0ae34226886544171f295a..27780ec4421d640c2c48d929485221ba0b78c4ac 100644 --- a/modules/Bio/EnsEMBL/PepDnaAlignFeature.pm +++ b/modules/Bio/EnsEMBL/PepDnaAlignFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/PredictionExon.pm b/modules/Bio/EnsEMBL/PredictionExon.pm index f5f1e0424c07c55cf8e5e3f30c4da1a39607da46..04648c48432af269d05fccf6428df6ab0f53f2e1 100644 --- a/modules/Bio/EnsEMBL/PredictionExon.pm +++ b/modules/Bio/EnsEMBL/PredictionExon.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/PredictionTranscript.pm b/modules/Bio/EnsEMBL/PredictionTranscript.pm index d096660334b126c576ebe091a2126aa313273e73..a23a55b8f0ef1cd19e88be25cdfec2ae39dde20f 100644 --- a/modules/Bio/EnsEMBL/PredictionTranscript.pm +++ b/modules/Bio/EnsEMBL/PredictionTranscript.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/ProjectionSegment.pm b/modules/Bio/EnsEMBL/ProjectionSegment.pm index 69a012737c96ee8c5bb70c88c876b16f2644a575..01b8db865c3c697e8879002877b4b77b4bd1c007 100644 --- a/modules/Bio/EnsEMBL/ProjectionSegment.pm +++ b/modules/Bio/EnsEMBL/ProjectionSegment.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/ProteinFeature.pm b/modules/Bio/EnsEMBL/ProteinFeature.pm index d9b5368c34cddc4cdb4b69d42a7f87711a489919..6f678279e36ed0a13d5cc7465a0643ac221aa1cc 100755 --- a/modules/Bio/EnsEMBL/ProteinFeature.pm +++ b/modules/Bio/EnsEMBL/ProteinFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Registry.pm b/modules/Bio/EnsEMBL/Registry.pm index e19d6db9b2329dec6fe9fbf9e7829a821ec67eb3..9991cda8176a6478eb1457bbcea848e90d960037 100644 --- a/modules/Bio/EnsEMBL/Registry.pm +++ b/modules/Bio/EnsEMBL/Registry.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/RepeatConsensus.pm b/modules/Bio/EnsEMBL/RepeatConsensus.pm index 74890e8e2019b9b6d0b1af9d23bdbcb099df7ce2..3705c52a52158b751df965db8ea7983dc02b8720 100644 --- a/modules/Bio/EnsEMBL/RepeatConsensus.pm +++ b/modules/Bio/EnsEMBL/RepeatConsensus.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/RepeatFeature.pm b/modules/Bio/EnsEMBL/RepeatFeature.pm index 2a49e599a3cf4b4811bfff2b7ba45e1bac94387a..b886ece048abd6afc9a0ac6e73bce7316e810392 100644 --- a/modules/Bio/EnsEMBL/RepeatFeature.pm +++ b/modules/Bio/EnsEMBL/RepeatFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm b/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm index 993146d323c375e07973519466fc432262fda086..29f282dd2847a0a0c792c73d6814fc80abe18d9d 100644 --- a/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm +++ b/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Root.pm b/modules/Bio/EnsEMBL/Root.pm index 02dba44107e029e767ecd6c1bc4c5be220f8a1ab..a53882e4685bc0a8e798fd9d695ba70a81829bc5 100644 --- a/modules/Bio/EnsEMBL/Root.pm +++ b/modules/Bio/EnsEMBL/Root.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/SNP.pm b/modules/Bio/EnsEMBL/SNP.pm index 5437bef03062fadd743c995569247c2c35b2acdb..6245b3bb1cd95073b6133f33901d31736da7decb 100644 --- a/modules/Bio/EnsEMBL/SNP.pm +++ b/modules/Bio/EnsEMBL/SNP.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/SeqEdit.pm b/modules/Bio/EnsEMBL/SeqEdit.pm index 4a95922a0726771818ee06811a51ce429a21f6ec..5ab6940cdc21276dcb016e3ba2d3cdfe34d1d308 100644 --- a/modules/Bio/EnsEMBL/SeqEdit.pm +++ b/modules/Bio/EnsEMBL/SeqEdit.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/SeqFeature.pm b/modules/Bio/EnsEMBL/SeqFeature.pm index d093fd36f377ba765666ff7c6ffbb7a1efd1b792..ef084f2c6ef121ca6d706e12f011061216dc248e 100755 --- a/modules/Bio/EnsEMBL/SeqFeature.pm +++ b/modules/Bio/EnsEMBL/SeqFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/SeqFeatureI.pm b/modules/Bio/EnsEMBL/SeqFeatureI.pm index fb94c91d96d6f6b5d258b83648e04ad9e174414a..edeade9d0580bb99480b39db6f29dc5f0b4c4465 100755 --- a/modules/Bio/EnsEMBL/SeqFeatureI.pm +++ b/modules/Bio/EnsEMBL/SeqFeatureI.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/SeqRegionSynonym.pm b/modules/Bio/EnsEMBL/SeqRegionSynonym.pm index ba08f8d5bb7df89ef1694b8ad3a743748dab13c9..57d4296095de5de22b6bc306581400e15b48a3e4 100644 --- a/modules/Bio/EnsEMBL/SeqRegionSynonym.pm +++ b/modules/Bio/EnsEMBL/SeqRegionSynonym.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/SimpleFeature.pm b/modules/Bio/EnsEMBL/SimpleFeature.pm index ac88f00453a2bcdeb55072b85249fd1d23623333..3a269df237f47371428e94283759cbb457b1b46f 100644 --- a/modules/Bio/EnsEMBL/SimpleFeature.pm +++ b/modules/Bio/EnsEMBL/SimpleFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Slice.pm b/modules/Bio/EnsEMBL/Slice.pm index 01489726d446f5fd00c9e7e29c6c917057d998a2..ecc9d32e9168a5c50b6f543e3ac4a641c01c47b9 100644 --- a/modules/Bio/EnsEMBL/Slice.pm +++ b/modules/Bio/EnsEMBL/Slice.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/SplicingEvent.pm b/modules/Bio/EnsEMBL/SplicingEvent.pm index d493fbf6e2e385d30ad2c51afdf3fc0acbc1a7c4..c49684e5d49a37e756c092d18bca41c737bb42d0 100644 --- a/modules/Bio/EnsEMBL/SplicingEvent.pm +++ b/modules/Bio/EnsEMBL/SplicingEvent.pm @@ -1,7 +1,7 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/SplicingEventFeature.pm b/modules/Bio/EnsEMBL/SplicingEventFeature.pm index 32ec6967b800cf74f1c4a6112c2b5167a599f9e2..0cb5b7616cf9f7ea186bb5578506c82ad3b72119 100644 --- a/modules/Bio/EnsEMBL/SplicingEventFeature.pm +++ b/modules/Bio/EnsEMBL/SplicingEventFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/SplicingTranscriptPair.pm b/modules/Bio/EnsEMBL/SplicingTranscriptPair.pm index acdd875affc90c0c17d66882780d5ebb1e958f4d..0604e822e47460142a2c182fcdb6bb15836af4cb 100644 --- a/modules/Bio/EnsEMBL/SplicingTranscriptPair.pm +++ b/modules/Bio/EnsEMBL/SplicingTranscriptPair.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/StableIdEvent.pm b/modules/Bio/EnsEMBL/StableIdEvent.pm index bacca9b4387833b9301bd7d8c1c87f13a154005f..149cb51323fb55ab199a19ae1f79007e6272ba8c 100644 --- a/modules/Bio/EnsEMBL/StableIdEvent.pm +++ b/modules/Bio/EnsEMBL/StableIdEvent.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/StableIdHistoryTree.pm b/modules/Bio/EnsEMBL/StableIdHistoryTree.pm index ad241a12f45668abdd0923c341d8e151edb26435..33a06ad2226344407919a88db2ca42559cf6b0cd 100644 --- a/modules/Bio/EnsEMBL/StableIdHistoryTree.pm +++ b/modules/Bio/EnsEMBL/StableIdHistoryTree.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Storable.pm b/modules/Bio/EnsEMBL/Storable.pm index d7b48d02267163841f134c0c67949d85512bdf7f..8266db8315ccb8ebdd012ba12c8ecf4c284ae963 100644 --- a/modules/Bio/EnsEMBL/Storable.pm +++ b/modules/Bio/EnsEMBL/Storable.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/StrainSlice.pm b/modules/Bio/EnsEMBL/StrainSlice.pm index fd75ca52992f63e71c457ff979d2bb6246d13e0e..29b35e5afd4395c9f8fefc3c0ff997eb436bc71f 100644 --- a/modules/Bio/EnsEMBL/StrainSlice.pm +++ b/modules/Bio/EnsEMBL/StrainSlice.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/TopLevelAssemblyMapper.pm b/modules/Bio/EnsEMBL/TopLevelAssemblyMapper.pm index c2794c684cdb1de2461f51e31167f5a8b9a32ed0..6d2b07d7c9ad761152b65796b2be49859f926d93 100644 --- a/modules/Bio/EnsEMBL/TopLevelAssemblyMapper.pm +++ b/modules/Bio/EnsEMBL/TopLevelAssemblyMapper.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Transcript.pm b/modules/Bio/EnsEMBL/Transcript.pm index d7f4bfa238285fb034866b6f39718e476de17516..8b7749051761369a39f9497fd21b390ab1becdf4 100755 --- a/modules/Bio/EnsEMBL/Transcript.pm +++ b/modules/Bio/EnsEMBL/Transcript.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/TranscriptFactory.pm b/modules/Bio/EnsEMBL/TranscriptFactory.pm index eaefd4089c2cd93b546edaf64a04d20bd534dca3..8ff2a2df59772a750d594643dbea5f503dc21a30 100755 --- a/modules/Bio/EnsEMBL/TranscriptFactory.pm +++ b/modules/Bio/EnsEMBL/TranscriptFactory.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/TranscriptMapper.pm b/modules/Bio/EnsEMBL/TranscriptMapper.pm index 43dc363211ce2878496b19224d4494fb19f62ab0..4cb9b02b60090709b7192311f670803f3e42616a 100644 --- a/modules/Bio/EnsEMBL/TranscriptMapper.pm +++ b/modules/Bio/EnsEMBL/TranscriptMapper.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Translation.pm b/modules/Bio/EnsEMBL/Translation.pm index ca2e5196a0e26a196600501481f65a010d84ba02..83279690c5671d6f35ffe847f3a77227e59996d9 100755 --- a/modules/Bio/EnsEMBL/Translation.pm +++ b/modules/Bio/EnsEMBL/Translation.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/UnconventionalTranscriptAssociation.pm b/modules/Bio/EnsEMBL/UnconventionalTranscriptAssociation.pm index eda9324de8c2cba18bf9fcefd14f8cebe1f5971b..65ea48f0be9c143a70db551a75c90c6968bf83fa 100644 --- a/modules/Bio/EnsEMBL/UnconventionalTranscriptAssociation.pm +++ b/modules/Bio/EnsEMBL/UnconventionalTranscriptAssociation.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/UnmappedObject.pm b/modules/Bio/EnsEMBL/UnmappedObject.pm index 526bd2eec79e25b0d26e811146d517388f66bede..313f5e3a0e7c77bf5502a7d3e931c16bcf2b4bff 100644 --- a/modules/Bio/EnsEMBL/UnmappedObject.pm +++ b/modules/Bio/EnsEMBL/UnmappedObject.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Upstream.pm b/modules/Bio/EnsEMBL/Upstream.pm index 11ba8b069d3812eecddf5a24e177e4fe56d94cac..d2719bee82d4f59d8e3c46cefcdc5c31ec2d184c 100644 --- a/modules/Bio/EnsEMBL/Upstream.pm +++ b/modules/Bio/EnsEMBL/Upstream.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Argument.pm b/modules/Bio/EnsEMBL/Utils/Argument.pm index d944afbf47209a40656a6b8a965f56880afa2e5f..f7babd2f9abd1c954bbd4e6a971c9f187a285b8d 100644 --- a/modules/Bio/EnsEMBL/Utils/Argument.pm +++ b/modules/Bio/EnsEMBL/Utils/Argument.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/AssemblyProjector.pm b/modules/Bio/EnsEMBL/Utils/AssemblyProjector.pm index 5ff469d91cc7785a23b3e48d6c45aad2862ce6ca..638feaad46bbb092a7343227d0d217785fc32f12 100644 --- a/modules/Bio/EnsEMBL/Utils/AssemblyProjector.pm +++ b/modules/Bio/EnsEMBL/Utils/AssemblyProjector.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/BitString.pm b/modules/Bio/EnsEMBL/Utils/BitString.pm index 1e3dcd9f3b050490e27a5e67d6d08b7f9e07d04e..1b4440f48d2d2c4e3e56f0e962bfd910e4da9904 100755 --- a/modules/Bio/EnsEMBL/Utils/BitString.pm +++ b/modules/Bio/EnsEMBL/Utils/BitString.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/CigarString.pm b/modules/Bio/EnsEMBL/Utils/CigarString.pm index 9fd3de98d67e0d53ae5b5126aead2690be3a88b1..4759a0fd0bdc245360106134bc4d01fdddfbe409 100644 --- a/modules/Bio/EnsEMBL/Utils/CigarString.pm +++ b/modules/Bio/EnsEMBL/Utils/CigarString.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Collector.pm b/modules/Bio/EnsEMBL/Utils/Collector.pm index 507d1ef5b01ee6649a7d7720adc992a731cc8ea2..513fe5a57c15eae10b6b73c6320d7506ba9a99cf 100644 --- a/modules/Bio/EnsEMBL/Utils/Collector.pm +++ b/modules/Bio/EnsEMBL/Utils/Collector.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/ConfParser.pm b/modules/Bio/EnsEMBL/Utils/ConfParser.pm index 82041233e71f08f50b3127749b5524ea73686175..008b4310d061e4888f375eca58df89221120a480 100644 --- a/modules/Bio/EnsEMBL/Utils/ConfParser.pm +++ b/modules/Bio/EnsEMBL/Utils/ConfParser.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/ConfigRegistry.pm b/modules/Bio/EnsEMBL/Utils/ConfigRegistry.pm index 7d5443b819fc0f636ccce9f537f3bdbf48d1aa8d..4eee78fff6278da53339b268d65e1c59cec0fc8e 100644 --- a/modules/Bio/EnsEMBL/Utils/ConfigRegistry.pm +++ b/modules/Bio/EnsEMBL/Utils/ConfigRegistry.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/ConversionSupport.pm b/modules/Bio/EnsEMBL/Utils/ConversionSupport.pm index 6c3b44f1e8e7a79eb4a30868480351256e81a62b..c82f6cea373341b159164efb54882c1e134698a3 100644 --- a/modules/Bio/EnsEMBL/Utils/ConversionSupport.pm +++ b/modules/Bio/EnsEMBL/Utils/ConversionSupport.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter.pm b/modules/Bio/EnsEMBL/Utils/Converter.pm index 2aec0beffbd40118e2d21621311ea70cb888a61b..9952018888510e06e0c36d293fce61918ffe8a7f 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens.pm index 82628666d0887c61c4ecbf13148b3ce186db1a30..53511b3e5291767d58aad40affa31c925d588ab8 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_analysis.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_analysis.pm index 412d9accec60b2ad172c9b2e08c063addfe456c9..bfb5f2aaad92c84785ce588fb825b795991dc2e3 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_analysis.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_analysis.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_exon.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_exon.pm index 72ed678f5054348ace5c93ac35b7af0b1c3707ef..e38a6ae0fbb5b18eff228f974aa931f6ee86ea2c 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_exon.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_exon.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_featurePair.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_featurePair.pm index deee09e5ef5ef3e0590236a1e876d5b12605998a..3ecce405ca3ae9e8df306d5dbd07aef788fe518a 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_featurePair.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_featurePair.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_gene.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_gene.pm index c673daab045c10b186d5d71633a8b3a047188c9a..2e025b4808d21968bc5a60f985249e252c5233af 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_gene.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_gene.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hit.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hit.pm index 8312b98c51ab8119d843074b8ed7be8bfde3e114..23f389668522cd557bc19e4d4c1024f1b02df530 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hit.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hit.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hsp.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hsp.pm index b62395b122c04ee29947bca287348aa35383a019..4ac5321a47ef1966f3aa953430a2ee66e3f6e180 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hsp.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hsp.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_predictionExon.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_predictionExon.pm index 29ba0b8500da4572a99a5988f64127fa6497dd2f..a7bbf30cffc26008e0fcb012dc8d7f9af5c21279 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_predictionExon.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_predictionExon.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_predictionGene.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_predictionGene.pm index 7dc9eba1eafcfdd182ee1bebfa52d65c3338bb02..37de5d994a78cf157c8a8a72b715009ed3c35e9a 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_predictionGene.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_predictionGene.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_seqFeature.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_seqFeature.pm index e85627b070fcb44736b069c3ce3ef8bf0b838f98..7fad7c3450100e04ff28a1ce2c4f97b2e5eccbd4 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_seqFeature.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_seqFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_transcript.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_transcript.pm index 4ad45d026e7ec75e7803010a1c667c6124b27d7e..a25263421cd0fc5865b888212f68013eadb526b0 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_transcript.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_transcript.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/ens_bio.pm b/modules/Bio/EnsEMBL/Utils/Converter/ens_bio.pm index b76c4e1d5c153d106d77d3ad83ae152086f8b981..766624eeec594c9d76a5ce376f73a85a18bd0c0c 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/ens_bio.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/ens_bio.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/ens_bio_featurePair.pm b/modules/Bio/EnsEMBL/Utils/Converter/ens_bio_featurePair.pm index 01cfad70987eda7a7757a1882d0a6d46d109856a..1bd92c44bb996038c016e5baffd369865086585f 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/ens_bio_featurePair.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/ens_bio_featurePair.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Converter/ens_bio_seqFeature.pm b/modules/Bio/EnsEMBL/Utils/Converter/ens_bio_seqFeature.pm index 105300f915a79fe725730dbbd82e300010cb1c85..6d535ee7fb3c3e251218cc140c88bec13e669bb9 100644 --- a/modules/Bio/EnsEMBL/Utils/Converter/ens_bio_seqFeature.pm +++ b/modules/Bio/EnsEMBL/Utils/Converter/ens_bio_seqFeature.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/EasyArgv.pm b/modules/Bio/EnsEMBL/Utils/EasyArgv.pm index 01d1e27d1d7f5d3246a885a2f05abb7f2b054c46..bdd19295beaed872c6cc7bd9460a5f0c89bcbd58 100644 --- a/modules/Bio/EnsEMBL/Utils/EasyArgv.pm +++ b/modules/Bio/EnsEMBL/Utils/EasyArgv.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Eprof.pm b/modules/Bio/EnsEMBL/Utils/Eprof.pm index efe0df96a29d5c411f82794a8bca1c7250cb769b..b7818aec64cfa85ed03152b7955cf16a42c13595 100755 --- a/modules/Bio/EnsEMBL/Utils/Eprof.pm +++ b/modules/Bio/EnsEMBL/Utils/Eprof.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/EprofStack.pm b/modules/Bio/EnsEMBL/Utils/EprofStack.pm index d47b317d9f42e30464b5374555e807e431072d9b..6b4e2047d296f89aef03093748ae7a63d5fd50d2 100755 --- a/modules/Bio/EnsEMBL/Utils/EprofStack.pm +++ b/modules/Bio/EnsEMBL/Utils/EprofStack.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Exception.pm b/modules/Bio/EnsEMBL/Utils/Exception.pm index 7ee492b4b80d07dcaae0a29bf8d53c59c0cc392d..4d5100d60522c4f6d5cd7186eac0ce1eef433bbc 100644 --- a/modules/Bio/EnsEMBL/Utils/Exception.pm +++ b/modules/Bio/EnsEMBL/Utils/Exception.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Logger.pm b/modules/Bio/EnsEMBL/Utils/Logger.pm index 688a999c5865f52d3a639c35f2edcc5c720daf33..2daeb28c984949fedaded13bfde7a7670463436f 100644 --- a/modules/Bio/EnsEMBL/Utils/Logger.pm +++ b/modules/Bio/EnsEMBL/Utils/Logger.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/PolyA.pm b/modules/Bio/EnsEMBL/Utils/PolyA.pm index 0351a850acd31707ec3557fcca914862821244e2..6e9b634369987c72c54996e25e1e9e263d5d4588 100644 --- a/modules/Bio/EnsEMBL/Utils/PolyA.pm +++ b/modules/Bio/EnsEMBL/Utils/PolyA.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Scalar.pm b/modules/Bio/EnsEMBL/Utils/Scalar.pm index 878cd81531f2bf52b5b35b43951ae2b8dbea96ea..ce5ccef01aa66b5b4a118ddc81f1aecf6fcdc3eb 100644 --- a/modules/Bio/EnsEMBL/Utils/Scalar.pm +++ b/modules/Bio/EnsEMBL/Utils/Scalar.pm @@ -4,7 +4,7 @@ package Bio::EnsEMBL::Utils::Scalar; =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/SchemaConversion.pm b/modules/Bio/EnsEMBL/Utils/SchemaConversion.pm index 15ab49afabfc8fa78d6fd3312eed625cf9de436b..0557fb36adc1840c3851319a42f5bbbbff8c32e0 100644 --- a/modules/Bio/EnsEMBL/Utils/SchemaConversion.pm +++ b/modules/Bio/EnsEMBL/Utils/SchemaConversion.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/ScriptUtils.pm b/modules/Bio/EnsEMBL/Utils/ScriptUtils.pm index f4cc8f1de56ed2dca7e7ae37549737c4c91dde62..90179650e7ba86d524ce320bf0ccb2344b86f5b7 100644 --- a/modules/Bio/EnsEMBL/Utils/ScriptUtils.pm +++ b/modules/Bio/EnsEMBL/Utils/ScriptUtils.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/SeqDumper.pm b/modules/Bio/EnsEMBL/Utils/SeqDumper.pm index dca69768456176cefe07d5e13398632ff8ada443..acd6200b9e0ceaf2ff2f82a032ee66db072e6309 100644 --- a/modules/Bio/EnsEMBL/Utils/SeqDumper.pm +++ b/modules/Bio/EnsEMBL/Utils/SeqDumper.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/SeqRegionCache.pm b/modules/Bio/EnsEMBL/Utils/SeqRegionCache.pm index 763a5fdf33feea44e2699510126d28ef7cae3c08..29c74b61c46625799c6e93c35249ccb1c4fc7f15 100644 --- a/modules/Bio/EnsEMBL/Utils/SeqRegionCache.pm +++ b/modules/Bio/EnsEMBL/Utils/SeqRegionCache.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Sequence.pm b/modules/Bio/EnsEMBL/Utils/Sequence.pm index 3b840fd0f036e0e3348537faa5162c5208817696..6032f24b655a688d1825b3fb5a98ba7fb6438392 100644 --- a/modules/Bio/EnsEMBL/Utils/Sequence.pm +++ b/modules/Bio/EnsEMBL/Utils/Sequence.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/Slice.pm b/modules/Bio/EnsEMBL/Utils/Slice.pm index 94e4010971257d14ae7d4efeaee65f857b6a631f..32479b6266c5c8a882bb2692d42d335b2e616011 100644 --- a/modules/Bio/EnsEMBL/Utils/Slice.pm +++ b/modules/Bio/EnsEMBL/Utils/Slice.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/SqlHelper.pm b/modules/Bio/EnsEMBL/Utils/SqlHelper.pm index bc49f5ec4f4c2d4f0163c924d3bc2aa0755bad5c..9c6c001b417695d71cfa4e9bc2457ec65340a9df 100644 --- a/modules/Bio/EnsEMBL/Utils/SqlHelper.pm +++ b/modules/Bio/EnsEMBL/Utils/SqlHelper.pm @@ -4,7 +4,7 @@ package Bio::EnsEMBL::Utils::SqlHelper; =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/TranscriptAlleles.pm b/modules/Bio/EnsEMBL/Utils/TranscriptAlleles.pm index b9180f3c7dbe345653516f9c225a820675d7623d..c1c7ac0326de0590746585c989c473767cc724d7 100644 --- a/modules/Bio/EnsEMBL/Utils/TranscriptAlleles.pm +++ b/modules/Bio/EnsEMBL/Utils/TranscriptAlleles.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/TranscriptSNPs.pm b/modules/Bio/EnsEMBL/Utils/TranscriptSNPs.pm index f43c906390a815565ced11ef2d70d05626962ae9..65fb18275be9a4141a3c8a841ef6fdc44ea775f9 100644 --- a/modules/Bio/EnsEMBL/Utils/TranscriptSNPs.pm +++ b/modules/Bio/EnsEMBL/Utils/TranscriptSNPs.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/User_defined_load.pm b/modules/Bio/EnsEMBL/Utils/User_defined_load.pm index 6507571775ed00921abbca994b4af1c3f64290ca..f99b9413d7efc859f5f42d25003471e546e825da 100644 --- a/modules/Bio/EnsEMBL/Utils/User_defined_load.pm +++ b/modules/Bio/EnsEMBL/Utils/User_defined_load.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/VegaCuration/Gene.pm b/modules/Bio/EnsEMBL/Utils/VegaCuration/Gene.pm index 6a19ac58c656e646a18c663952f51228dcc20bf0..7a3c6507b7cb219c5dea653bff116cc4a49170a6 100644 --- a/modules/Bio/EnsEMBL/Utils/VegaCuration/Gene.pm +++ b/modules/Bio/EnsEMBL/Utils/VegaCuration/Gene.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/VegaCuration/Transcript.pm b/modules/Bio/EnsEMBL/Utils/VegaCuration/Transcript.pm index 37a6d711928e96c665dfaa727b0e28a0d7defdaa..02aa33e7ccdc7f8e89a0d8098f7b617d38fdbbfc 100644 --- a/modules/Bio/EnsEMBL/Utils/VegaCuration/Transcript.pm +++ b/modules/Bio/EnsEMBL/Utils/VegaCuration/Transcript.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. diff --git a/modules/Bio/EnsEMBL/Utils/VegaCuration/Translation.pm b/modules/Bio/EnsEMBL/Utils/VegaCuration/Translation.pm index f2027e6ad4c68e5b99197434334118571b5c8628..fe949deeed3dbd48bd2c193bd93d191b9a96c43c 100644 --- a/modules/Bio/EnsEMBL/Utils/VegaCuration/Translation.pm +++ b/modules/Bio/EnsEMBL/Utils/VegaCuration/Translation.pm @@ -1,6 +1,6 @@ =head1 LICENSE - Copyright (c) 1999-2010 The European Bioinformatics Institute and + Copyright (c) 1999-2011 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. For license details, please see