diff --git a/misc-scripts/xref_mapping/xref_config.ini b/misc-scripts/xref_mapping/xref_config.ini
index 90dc5dfc19c2b1cd821ba40cc3eeb8a11981a823..fb839fedfd0967a6380f853c60025cbc7a557b63 100644
--- a/misc-scripts/xref_mapping/xref_config.ini
+++ b/misc-scripts/xref_mapping/xref_config.ini
@@ -389,16 +389,6 @@ parser          = FlybaseParser
 release_uri     =
 data_uri        = ftp://ftp.flybase.net/genomes/Drosophila_melanogaster/dmel_r5.39_FB2011_07/gff/dmel-all-*.gff.gz
 
-#[source CCDS::MULTI]
-## Used by homo_sapiens, mus_musculus
-#name            = CCDS
-#download        = Y
-#order           = 10
-#priority        = 1
-#prio_descr      =
-#parser          = CCDSParser
-#release_uri     =
-#data_uri        = file:CCDS/CCDS.txt
 
 [source CCDS::homo_sapiens]
 # Used by homo_sapiens
@@ -409,7 +399,7 @@ priority        = 1
 prio_descr      =
 parser          = CCDSParser
 release_uri     =
-data_uri        = script:host=>ens-livemirror,dbname=>ccds_human_66,tran_name=>ENST,
+data_uri        = script:host=>ens-livemirror,dbname=>ccds_human_67,tran_name=>ENST,
 
 [source CCDS::mus_musculus]
 # Used by mus_musculus
@@ -420,7 +410,7 @@ priority        = 1
 prio_descr      =
 parser          = CCDSParser
 release_uri     =
-data_uri        = script:host=>ens-livemirror,dbname=>ccds_mouse_66,tran_name=>ENSMUST,
+data_uri        = script:host=>ens-livemirror,dbname=>ccds_mouse_67,tran_name=>ENSMUST,
 
 [source Celera_Pep::anopheles_gambiae]
 # Used by anopheles_gambiae
@@ -1164,7 +1154,7 @@ priority        = 2
 prio_descr      = ccds
 parser          = HGNC_CCDSParser
 release_uri     =
-data_uri        = script:wget=>http://www.genenames.org/cgi-bin/hgnc_downloads.cgi?title=HGNC+output+data&hgnc_dbtag=on&col=gd_hgnc_id&col=gd_status&col=gd_ccds_ids&status=Approved&status_opt=2&level=pri&=on&where=&order_by=gd_app_sym_sort&limit=&format=text&submit=submit&.cgifields=&.cgifields=level&.cgifields=chr&.cgifields=status&.cgifields=hgnc_dbtag,host=>ens-livemirror,dbname=>ccds_human_66,
+data_uri        = script:wget=>http://www.genenames.org/cgi-bin/hgnc_downloads.cgi?title=HGNC+output+data&hgnc_dbtag=on&col=gd_hgnc_id&col=gd_status&col=gd_ccds_ids&status=Approved&status_opt=2&level=pri&=on&where=&order_by=gd_app_sym_sort&limit=&format=text&submit=submit&.cgifields=&.cgifields=level&.cgifields=chr&.cgifields=status&.cgifields=hgnc_dbtag,host=>ens-livemirror,dbname=>ccds_human_67,
 
 
 [source HGNC::homo_sapiens#07]
@@ -1489,7 +1479,7 @@ prio_descr      =
 parser          = Mim2GeneParser
 dependent       = MIM,EntrezGene
 release_uri     =
-data_uri        = ftp://ftp.ncbi.nih.gov/gene/DATA/mim2gene
+data_uri        = ftp://grcf.jhmi.edu/OMIM/mim2gene.txt
 
 [source MGI::mus_musculus#04]
 # Used by mus_musculus
@@ -1887,7 +1877,7 @@ priority        = 1
 prio_descr      = ccds
 parser          = RefSeq_CCDSParser
 release_uri     =
-data_uri        = script:host=>ens-livemirror,dbname=>ccds_human_66,
+data_uri        = script:host=>ens-livemirror,dbname=>ccds_human_67,
 
 [source RefSeq_dna::homo_sapiens#01]
 # Used by homo_sapiens
@@ -1896,9 +1886,9 @@ download        = Y
 order           = 20
 priority        = 2
 prio_descr      = refseq
-parser          = RefSeqParser
+parser          = RefSeqGPFFParser
 release_uri     = ftp://ftp.ncbi.nih.gov/refseq/release/release-notes/RefSeq-release*.txt
-data_uri        = ftp://ftp.ncbi.nih.gov/refseq/H_sapiens/mRNA_Prot/human.rna.fna.gz
+data_uri        = ftp://ftp.ncbi.nih.gov/refseq/H_sapiens/mRNA_Prot/human.rna.gbff.gz
 
 [source RefSeq_dna::mus_musculus#01]
 # Used by mus_musculus
@@ -1920,7 +1910,7 @@ priority        = 1
 prio_descr      = ccds
 parser          = RefSeq_CCDSParser
 release_uri     =
-data_uri        = script:host=>ens-livemirror,dbname=>ccds_mouse_66,
+data_uri        = script:host=>ens-livemirror,dbname=>ccds_mouse_67,
 
 
 [source RefSeq_dna::pan_troglodytes]