From 21058827fdfe5b45f81e6146059e9af39640980e Mon Sep 17 00:00:00 2001 From: Ian Longden <ianl@sanger.ac.uk> Date: Tue, 15 Apr 2008 21:23:03 +0000 Subject: [PATCH] tetraodon added --- misc-scripts/xref_mapping/xref_config.ini | 64 +++++++++++++++++++++++ 1 file changed, 64 insertions(+) diff --git a/misc-scripts/xref_mapping/xref_config.ini b/misc-scripts/xref_mapping/xref_config.ini index 718adb4c49..fc395951af 100644 --- a/misc-scripts/xref_mapping/xref_config.ini +++ b/misc-scripts/xref_mapping/xref_config.ini @@ -2100,6 +2100,51 @@ parser = DirectParser release_uri = data_uri = file:platypus/oxford_transcript_list +[source Genoscope_pred_gene::tetraodon_nigroviridis] +# Used by +name = Genoscope_pred_gene +download = Y +order = 40 +priority = 1 +prio_descr = +parser = DirectParser +release_uri = +data_uri = file:tetraodon_nigroviridis/genoscope_gene_list + +[source Genoscope_pred_transcript::tetraodon_nigroviridis] +# Used by +name = Genoscope_tnig_transcript +download = Y +order = 40 +priority = 1 +prio_descr = +parser = DirectParser +release_uri = +data_uri = file:tetraodon_nigroviridis/genoscope_transcript_list + +[source Genoscope_pred_translation::tetraodon_nigroviridis] +# Used by +name = Genoscope_pred_translation +download = Y +order = 40 +priority = 1 +prio_descr = +parser = DirectParser +release_uri = +data_uri = file:tetraodon_nigroviridis/genoscope_translation_list + + +[source Genoscope_annotated_gene::tetraodon_nigroviridis] +# Used by +name = Genoscope_annotated_gene +download = Y +order = 40 +priority = 1 +prio_descr = +parser = DirectParser +release_uri = +data_uri = file:tetraodon_nigroviridis/genescope_annotated_gene_list + ######################################################################## # SPECIES # # # @@ -2635,6 +2680,25 @@ source = Uniprot/SWISSPROT::MULTI source = Uniprot/Varsplic::MULTI source = ncRNA::takifugu_rubripes +[species tetraodon_nigroviridis] +taxonomy_id = 99883 +aliases = tetraodon, tnigroviridis, tnig, tetraodon_nigroviridis +source = EntrezGene::MULTI +source = GO::MULTI +source = InterproGO::MULTI +source = Interpro::MULTI +source = RefSeq_dna::MULTI-vertebrate_other +source = RefSeq_peptide::MULTI-vertebrate_other +source = Uniprot/SPTREMBL::MULTI +source = Uniprot/SWISSPROT::MULTI +source = Uniprot/Varsplic::MULTI +#source = ncRNA::tetraodon_nigroviridis +source = Genoscope_pred_gene::tetraodon_nigroviridis +source = Genoscope_pred_transcript::tetraodon_nigroviridis +source = Genoscope_pred_translation::tetraodon_nigroviridis +source = Genoscope_annotated_gene::tetraodon_nigroviridis + + [species tupaia_belangeri] taxonomy_id = 37347 aliases = treeshrew -- GitLab