From 27d1006af74f17721c74db17bdb12068aaeac0a7 Mon Sep 17 00:00:00 2001
From: Glenn Proctor <gp1@sanger.ac.uk>
Date: Fri, 24 Nov 2006 08:43:47 +0000
Subject: [PATCH] Rmeoved debug.
---
misc-scripts/xref_projection/project_display_xrefs.pl | 5 +----
1 file changed, 1 insertion(+), 4 deletions(-)
diff --git a/misc-scripts/xref_projection/project_display_xrefs.pl b/misc-scripts/xref_projection/project_display_xrefs.pl
index 1334c9611f..f630b8293f 100644
--- a/misc-scripts/xref_projection/project_display_xrefs.pl
+++ b/misc-scripts/xref_projection/project_display_xrefs.pl
@@ -292,11 +292,8 @@ sub project_go_terms {
# also exclude ISS terms (manually projected based on orthologs)
next if (ref($dbEntry) ne "Bio::EnsEMBL::GoXref");
- # TODO - this will skip whole xref if any evidence type is IEA
- # even if there are more than one evidence type for this GO term
- # Should be changed to just skip IEA one, not others
+ # Skip the whole dbEntry if one or more if its evidence codes isn't in the whitelist
foreach my $et (@{$dbEntry->get_all_linkage_types}){
- print "$et " . "\n";
next DBENTRY if (!grep(/$et/, @evidence_codes));
}
--
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