diff --git a/misc-scripts/xref_mapping/XrefMapper/danio_rerio.pm b/misc-scripts/xref_mapping/XrefMapper/danio_rerio.pm
index 3e051655b5dc70c54abe7140f9c43f742e237381..24a424fb16a0df2ae2f4402a942811c73739f834 100644
--- a/misc-scripts/xref_mapping/XrefMapper/danio_rerio.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/danio_rerio.pm
@@ -92,11 +92,8 @@ sub transcript_display_xref_sources {
 
   my %ignore;
 
-  if(!$fullmode){
-    $ignore{"EntrezGene"}= 'FROM:RefSeq_[pd][en][pa].*_predicted';
-  }
-  else{
-    $ignore{"EntrezGene"} =(<<'IEG');
+
+  $ignore{"EntrezGene"} =(<<'IEG');
 SELECT DISTINCT ox.object_xref_id
   FROM object_xref ox, dependent_xref dx, 
        xref xmas, xref xdep, 
@@ -118,8 +115,6 @@ SELECT object_xref_id
       AND priority_description = 'protein_evidence_gt_3'
 BIGN
 
-  }
-  
   return [\@list,\%ignore];
 
 }
diff --git a/misc-scripts/xref_mapping/XrefMapper/ornithorhynchus_anatinus.pm b/misc-scripts/xref_mapping/XrefMapper/ornithorhynchus_anatinus.pm
index 3b980282a1c0e5492d47c235b412e89625ef8f4f..04783b230c6227646dd6e1e670e85c528bc0be2b 100644
--- a/misc-scripts/xref_mapping/XrefMapper/ornithorhynchus_anatinus.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/ornithorhynchus_anatinus.pm
@@ -29,11 +29,8 @@ sub transcript_display_xref_sources {
 		EntrezGene);
 
   my %ignore;
-  if(!$fullmode){
-    $ignore{"EntrezGene"}= 'FROM:RefSeq_[pd][en][pa].*_predicted';
-  }
-  else{
-    $ignore{"EntrezGene"} =(<<'IEG');
+
+  $ignore{"EntrezGene"} =(<<'IEG');
 SELECT DISTINCT ox.object_xref_id
   FROM object_xref ox, dependent_xref dx, 
        xref xmas, xref xdep, 
@@ -48,15 +45,13 @@ SELECT DISTINCT ox.object_xref_id
           ox.ox_status = "DUMP_OUT"
 IEG
 
-    $ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
+  $ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
 SELECT object_xref_id
     FROM object_xref JOIN xref USING(xref_id) JOIN source USING(source_id)
      WHERE ox_status = 'DUMP_OUT' AND name = 'Uniprot/SPTREMBL' 
       AND priority_description = 'protein_evidence_gt_3'
 BIGN
 
-  }
-  
   return [\@list,\%ignore];
 }
 
diff --git a/misc-scripts/xref_mapping/XrefMapper/rattus_norvegicus.pm b/misc-scripts/xref_mapping/XrefMapper/rattus_norvegicus.pm
index b87e2a68bb41f9c2db47e77ad30e04fdd4a697f8..9d90638046d9bfb0fd927b5aec138d0695116e82 100644
--- a/misc-scripts/xref_mapping/XrefMapper/rattus_norvegicus.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/rattus_norvegicus.pm
@@ -16,7 +16,6 @@ use vars '@ISA';
 
 sub transcript_display_xref_sources {
   my $self     = shift;
-  my $fullmode = shift;
 
   my @list = qw(RFAM
 	      miRBase
@@ -32,12 +31,8 @@ sub transcript_display_xref_sources {
 
 
   my %ignore;
-  
-  if(!$fullmode){
-    $ignore{"EntrezGene"}= 'FROM:RefSeq_[pd][en][pa].*_predicted';
-  }
-  else{
-    $ignore{"EntrezGene"} =(<<'IEG');
+
+  $ignore{"EntrezGene"} =(<<'IEG');
 SELECT DISTINCT ox.object_xref_id
   FROM object_xref ox, dependent_xref dx, 
        xref xmas, xref xdep, 
@@ -52,15 +47,13 @@ SELECT DISTINCT ox.object_xref_id
           ox.ox_status = "DUMP_OUT"
 IEG
 
-    $ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
+  $ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
 SELECT object_xref_id
     FROM object_xref JOIN xref USING(xref_id) JOIN source USING(source_id)
      WHERE ox_status = 'DUMP_OUT' AND name = 'Uniprot/SPTREMBL' 
       AND priority_description = 'protein_evidence_gt_3'
 BIGN
 
-  }
-  
   return [\@list,\%ignore];
   
 }
diff --git a/misc-scripts/xref_mapping/XrefMapper/saccharomyces_cerevisiae.pm b/misc-scripts/xref_mapping/XrefMapper/saccharomyces_cerevisiae.pm
index deb9a063b9cbe773da45700add4e4ee79078f4f3..b371716ed844f8c5804397d721b86ab951124abb 100644
--- a/misc-scripts/xref_mapping/XrefMapper/saccharomyces_cerevisiae.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/saccharomyces_cerevisiae.pm
@@ -40,7 +40,6 @@ sub build_display_xrefs {
 
 sub transcript_display_xref_sources {
     my $self     = shift;
-    my $fullmode = shift;
 
     my @list = qw(
                 SGD_GENE
diff --git a/misc-scripts/xref_mapping/XrefMapper/schizosaccharomyces_pombe.pm b/misc-scripts/xref_mapping/XrefMapper/schizosaccharomyces_pombe.pm
index 971f14ab46e6fd6a987b97064eb2ba0d2421d224..353ddfffa7936b966dfd22fe421a5eaa53b843d6 100644
--- a/misc-scripts/xref_mapping/XrefMapper/schizosaccharomyces_pombe.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/schizosaccharomyces_pombe.pm
@@ -39,7 +39,6 @@ sub build_display_xrefs {
 
 sub transcript_display_xref_sources {
     my $self     = shift;
-    my $fullmode = shift;
 
     my @list = qw(
                 PomBase_GENE
diff --git a/misc-scripts/xref_mapping/XrefMapper/tetraodon_nigroviridis.pm b/misc-scripts/xref_mapping/XrefMapper/tetraodon_nigroviridis.pm
index 7c1284406b793bb63e48c587312211e489329b7f..2b798978372d4c5b1d47c875e6859dce5c65e2b5 100644
--- a/misc-scripts/xref_mapping/XrefMapper/tetraodon_nigroviridis.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/tetraodon_nigroviridis.pm
@@ -23,17 +23,14 @@ sub transcript_display_xref_sources {
 		LocusLink);
 
   my %ignore;
-  
-  if($fullmode){
 
-    $ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
+  $ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
 SELECT object_xref_id
     FROM object_xref JOIN xref USING(xref_id) JOIN source USING(source_id)
      WHERE ox_status = 'DUMP_OUT' AND name = 'Uniprot/SPTREMBL' 
       AND priority_description = 'protein_evidence_gt_3'
 BIGN
 
-  }
 
   return [\@list,\%ignore];
 
diff --git a/misc-scripts/xref_mapping/XrefMapper/xenopus_tropicalis.pm b/misc-scripts/xref_mapping/XrefMapper/xenopus_tropicalis.pm
index f200fd55073b7c01e95753611dd49dc928163614..31f966efbe63dc8540af5b0b9c87fee6d5e48d21 100644
--- a/misc-scripts/xref_mapping/XrefMapper/xenopus_tropicalis.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/xenopus_tropicalis.pm
@@ -36,7 +36,6 @@ sub gene_description_sources {
 
 sub transcript_display_xref_sources {
   my $self     = shift;
-  my $fullmode = shift;
 
   my @list = qw(Xenopus_Jamboree
 		MGI
@@ -52,11 +51,7 @@ sub transcript_display_xref_sources {
 
   my %ignore;
 
-  if(!$fullmode){
-    $ignore{"EntrezGene"}= 'FROM:RefSeq_[pd][en][pa].*_predicted';
-  }
-  else{
-    $ignore{"EntrezGene"} =(<<'IEG');
+  $ignore{"EntrezGene"} =(<<'IEG');
 SELECT DISTINCT ox.object_xref_id
   FROM object_xref ox, dependent_xref dx, 
        xref xmas, xref xdep, 
@@ -71,14 +66,13 @@ SELECT DISTINCT ox.object_xref_id
           ox.ox_status = "DUMP_OUT"
 IEG
 
-    $ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
+  $ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
 SELECT object_xref_id
     FROM object_xref JOIN xref USING(xref_id) JOIN source USING(source_id)
      WHERE ox_status = 'DUMP_OUT' AND name = 'Uniprot/SPTREMBL' 
       AND priority_description = 'protein_evidence_gt_3'
 BIGN
 
-  }
 
   return [\@list,\%ignore];
 }