Commit 35699be1 authored by Ian Longden's avatar Ian Longden
Browse files

analysis moved onto object_xref from identity_xref

parent 8a1481f6
......@@ -24,6 +24,7 @@
44 0000-00-00 00:00:00 Seg low_complexity NULL NULL /usr/local/ensembl/bin/seg NULL /usr/local/ensembl/bin/seg NULL Seg NULL Seg annot
42 0000-00-00 00:00:00 scanprosite prosite NULL /acari/analysis/iprscan/data/prosite.patterns /acari/analysis/iprscan/bin/scanregexpf.pl /acari/analysis/iprscan/data/confirm.pat /acari/analysis/iprscan/bin/scanregexpf.pl Prosite NULL PROSITE domain
71 0000-00-00 00:00:00 Superfamily Superfamily 1 /data/blastdb/Ensembl/sam/superfamily /acari/work1/mongin/superfamily/superfamily.pl 1 /acari/work1/mongin/superfamily/superfamily.pl Superfamily 1 Superfamily annot
119 2006-03-14 15:48:36 XrefExonerateDNA \N \N \N \N \N \N \N \N \N \N \N
1292 0000-00-00 00:00:00 SNPDensity \N \N \N \N \N \N \N \N \N \N \N
1293 0000-00-00 00:00:00 RepeatCoverage \N \N \N \N \N \N \N \N \N \N \N
1500 0000-00-00 00:00:00 miRanda \N \N \N \N \N \N \N \N \N \N \N
......
......@@ -9,8 +9,6 @@ CREATE TABLE `identity_xref` (
`cigar_line` text collate latin1_bin,
`score` double default NULL,
`evalue` double default NULL,
`analysis_id` int(11) default NULL,
PRIMARY KEY (`object_xref_id`),
KEY `analysis_idx` (`analysis_id`)
PRIMARY KEY (`object_xref_id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 COLLATE=latin1_bin;
1 \N schema_version 53
1 \N schema_version 54
2 1 assembly.default NCBI34
33 1 species.classification Chordata
32 1 species.classification Vertebrata
......
......@@ -4,6 +4,7 @@ CREATE TABLE `object_xref` (
`ensembl_object_type` enum('RawContig','Transcript','Gene','Translation','regulatory_factor','regulatory_feature') collate latin1_bin NOT NULL default 'RawContig',
`xref_id` int(10) unsigned NOT NULL default '0',
`linkage_annotation` VARCHAR(255) DEFAULT NULL,
analysis_id SMALLINT UNSIGNED NOT NULL,
UNIQUE KEY `ensembl_object_type` (`ensembl_object_type`,`ensembl_id`,`xref_id`),
KEY `oxref_idx` (`object_xref_id`,`xref_id`,`ensembl_object_type`,`ensembl_id`),
KEY `xref_idx` (`xref_id`,`ensembl_object_type`)
......
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