From 3f875976992ae3f383ee0b7d9cb695cb1988906b Mon Sep 17 00:00:00 2001
From: Ian Longden <ianl@sanger.ac.uk>
Date: Fri, 15 Jun 2007 15:04:37 +0000
Subject: [PATCH] reinstate call to cahce_seq_ids_with_mult_assemblys as this
has now been fixed
---
modules/Bio/EnsEMBL/AssemblyMapper.pm | 2 +-
modules/Bio/EnsEMBL/ChainedAssemblyMapper.pm | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/modules/Bio/EnsEMBL/AssemblyMapper.pm b/modules/Bio/EnsEMBL/AssemblyMapper.pm
index 5ed9941be6..2d4a9b8a90 100644
--- a/modules/Bio/EnsEMBL/AssemblyMapper.pm
+++ b/modules/Bio/EnsEMBL/AssemblyMapper.pm
@@ -97,7 +97,7 @@ sub new {
$self->adaptor($adaptor);
- #$adaptor->cache_seq_ids_with_mult_assemblys();
+ $adaptor->cache_seq_ids_with_mult_assemblys();
if(@coord_systems != 2) {
throw('Can only map between 2 coordinate systems. ' .
diff --git a/modules/Bio/EnsEMBL/ChainedAssemblyMapper.pm b/modules/Bio/EnsEMBL/ChainedAssemblyMapper.pm
index 7a38974304..5009716832 100644
--- a/modules/Bio/EnsEMBL/ChainedAssemblyMapper.pm
+++ b/modules/Bio/EnsEMBL/ChainedAssemblyMapper.pm
@@ -111,7 +111,7 @@ sub new {
scalar(@coord_systems) . ' were provided');
}
- #$adaptor->cache_seq_ids_with_mult_assemblys();
+ $adaptor->cache_seq_ids_with_mult_assemblys();
# Set the component, intermediate and assembled coordinate systems
$self->{'first_cs'} = $coord_systems[0];
--
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