diff --git a/modules/t/test-genome-DBs/homo_sapiens/patch/genome_statistics.txt b/modules/t/test-genome-DBs/homo_sapiens/patch/genome_statistics.txt index 3cb8ac20345e930b9e025b89dee0a9a779d8c455..8f48dd9cb8191a280997d5a6e2763068126ca130 100644 --- a/modules/t/test-genome-DBs/homo_sapiens/patch/genome_statistics.txt +++ b/modules/t/test-genome-DBs/homo_sapiens/patch/genome_statistics.txt @@ -10,5 +10,5 @@ 25 pseudogene_acnt 0 1 370 2013-11-28 09:42:06 35 PredictionTranscript 18 1 392 2013-11-28 09:42:09 34 coding_acnt 4 1 369 2013-11-28 09:42:06 -38 transcript 1 1 32 2013-11-28 09:42:06 -37 alt_transcript 0 1 33 2013-11-28 09:42:06 +38 transcript 6 1 32 2013-11-28 09:42:06 +37 alt_transcript 7 1 33 2013-11-28 09:42:06 diff --git a/modules/t/test-genome-DBs/homo_sapiens/patch/transcript.txt b/modules/t/test-genome-DBs/homo_sapiens/patch/transcript.txt index 1f0e939e146df686c25a7393923acadbf1aa09c9..3e4897dc8a9079f88c642d8d23380dc5e172d2ff 100644 --- a/modules/t/test-genome-DBs/homo_sapiens/patch/transcript.txt +++ b/modules/t/test-genome-DBs/homo_sapiens/patch/transcript.txt @@ -1 +1,14 @@ -2047706 633682 8407 27515 112375275 112390889 1 7795363 ensembl KNOWN \N 1 127 0 2 2006 2009-08-05 14:27:16 0000-00-00 00:00:00 +transcript_id gene_id analysis_id seq_region_id seq_region_start seq_region_end seq_region_strand display_xref_id source biotype status description is_current canonical_translation_id stable_id version created_date modified_date +2047721 633694 8049 27516 24313554 24316773 -1 3361763 havana protein_coding KNOWN NULL 1 1044677 ENST00000398344 4 2007-09-07 00:01:32 2009-08-05 14:27:16 +2047722 633694 8048 27516 24313554 24322019 -1 3361762 havana protein_coding KNOWN NULL 1 1044678 ENST00000350608 3 2008-04-29 11:17:41 2009-08-05 14:27:16 +2047724 633694 8049 27516 24313559 24315372 -1 3361766 havana protein_coding PUTATIVE NULL 1 1044679 ENST00000428792 1 2009-05-19 09:47:17 2009-05-19 09:47:17 +2047725 633694 8049 27516 24313567 24322660 -1 3361765 havana protein_coding PUTATIVE NULL 1 1044680 ENST00000404092 1 2008-04-29 11:17:41 2008-04-29 11:17:41 +2047730 633694 8049 27516 24315293 24316648 -1 3361764 havana protein_coding PUTATIVE NULL 1 1044681 ENST00000403754 3 2008-04-29 11:17:41 2009-08-05 14:27:16 +2047732 633694 8049 27516 24315293 24316648 -1 3361767 havana protein_coding PUTATIVE NULL 1 1044682 ENST00000430101 2 2009-05-19 09:47:17 2009-08-05 14:27:16 +2047743 633703 8048 1000759268 50202435 50208008 1 3423225 havana protein_coding KNOWN NULL 1 1044683 ENST00000282026 1 2008-04-29 11:17:41 2008-04-29 11:17:41 +2047745 633704 8049 1000759268 2537524 2571508 -1 3365094 havana protein_coding PUTATIVE NULL 1 1044684 ENST00000319888 6 2008-04-29 11:17:41 2012-03-20 10:52:24 +2047747 633704 8049 1000759268 2537530 2554691 -1 3365098 havana protein_coding PUTATIVE NULL 1 1044685 ENST00000576251 1 2012-03-20 10:52:24 2012-03-20 10:52:24 +2047750 633704 8048 1000759268 2538452 2571485 -1 3365096 havana protein_coding KNOWN NULL 1 1044687 ENST00000574538 1 2012-03-20 10:52:24 2012-03-20 10:52:24 +2047753 633704 8049 1000759268 2554785 2571232 -1 3365099 havana protein_coding PUTATIVE NULL 1 1044688 ENST00000577166 1 2012-03-20 10:52:24 2012-03-20 10:52:24 +2047755 633704 8049 1000759268 2567006 2571470 -1 3365097 havana protein_coding PUTATIVE NULL 1 1044689 ENST00000574676 1 2012-03-20 10:52:24 2012-03-20 10:52:24 +2047748 633705 8048 1001161223 28962606 28973082 -1 3446810 LRG database protein_coding KNOWN NULL 1 1044686 ENST00000426120 2 2009-05-19 09:47:17 2009-08-05 14:27:16