From 44c0c6d81326af974f68296a5560eaeefeb76369 Mon Sep 17 00:00:00 2001
From: Emmanuel Mongin <mongin@sanger.ac.uk>
Date: Fri, 13 Jun 2003 11:43:38 +0000
Subject: [PATCH] *** empty log message ***
---
misc-scripts/gene_description/gene-descriptions.pl | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/misc-scripts/gene_description/gene-descriptions.pl b/misc-scripts/gene_description/gene-descriptions.pl
index 1aeed0a072..dfb916bfed 100755
--- a/misc-scripts/gene_description/gene-descriptions.pl
+++ b/misc-scripts/gene_description/gene-descriptions.pl
@@ -253,7 +253,7 @@ while (my ($ensp, $ensg, $db, $acc, $qy_percid, $tg_percid) = $sth->fetchrow_arr
## Load regexps
-open REGEXP, $regexp_file;
+open (REGEXP, $regexp_file) || die "Can't open REGEX file: $regexp_file\n";
my @regexps;
while (my $line = <REGEXP>) {
@@ -376,7 +376,9 @@ sub parse_protein_database {
} else {
chomp $line;
- warn "\nCould not recognize line : \"$line\"\nCheck the input file format in $protein_database_file.\n\n";
+#took away the warning as many lines in SP have ID AC and nothing else
+
+# warn "\nCould not recognize line : \"$line\"\nCheck the input file format in $protein_database_file.\n\n";
# return 0;
}
}
--
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