From 45ee14311aa0ddbfe7c971a0571e3f6299f11d91 Mon Sep 17 00:00:00 2001
From: Magali Ruffier <mr6@ebi.ac.uk>
Date: Mon, 8 Feb 2016 17:27:54 +0000
Subject: [PATCH] deal with duplicates
---
misc-scripts/xref_mapping/XrefMapper/OfficialNaming.pm | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/misc-scripts/xref_mapping/XrefMapper/OfficialNaming.pm b/misc-scripts/xref_mapping/XrefMapper/OfficialNaming.pm
index cf9c994298..6a9bec5af9 100644
--- a/misc-scripts/xref_mapping/XrefMapper/OfficialNaming.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/OfficialNaming.pm
@@ -869,7 +869,7 @@ sub get_ins_xref_sth{
my $self= shift;
if(!defined($self->{'_ins_xref_sth'})){
- my $sql = "insert into xref (xref_id, source_id, accession, label, version, species_id, info_type, info_text, description) values (?, ?, ?, ?, 0, ".$self->species_id.", 'MISC', ?, ? )";
+ my $sql = "insert ignore into xref (xref_id, source_id, accession, label, version, species_id, info_type, info_text, description) values (?, ?, ?, ?, 0, ".$self->species_id.", 'MISC', ?, ? )";
print "_ins_xref sql is:-\n$sql\n";
$self->{'_ins_xref_sth'} = $self->xref->dbc->prepare($sql);
}
--
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