From 48f3ceffebac49033f2daa1992526f31dc70246c Mon Sep 17 00:00:00 2001
From: Kieron Taylor <ktaylor@ebi.ac.uk>
Date: Mon, 19 Mar 2012 16:18:40 +0000
Subject: [PATCH] Tidied up detritus left by removing duplicate masking step.
---
modules/Bio/EnsEMBL/RepeatMaskedSlice.pm | 5 ++---
1 file changed, 2 insertions(+), 3 deletions(-)
diff --git a/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm b/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm
index 92d97e545d..6ae8e12eb2 100644
--- a/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm
+++ b/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm
@@ -296,10 +296,9 @@ sub subseq {
}
#
- # mask the dna
+ # No need to mask sequence, seq() already does it for the new subsequence_slice
#
- my $dna = $subsequence_slice->seq();
- return $dna;
+ return $subsequence_slice->seq();
}
1;
--
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