From 5194744dee74c8f572bf2ab6637b507c206a4c30 Mon Sep 17 00:00:00 2001
From: juguang <juguang@sanger.ac.uk>
Date: Wed, 24 Nov 2004 07:08:49 +0000
Subject: [PATCH] comment out the line to call attach_seq, for the method is no
more in v26
---
modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hsp.pm | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hsp.pm b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hsp.pm
index 8889aebd2b..f7b0f91d2b 100644
--- a/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hsp.pm
+++ b/modules/Bio/EnsEMBL/Utils/Converter/bio_ens_hsp.pm
@@ -96,10 +96,10 @@ sub _convert_single_to_alignFeature {
my $align_feature;
if($program =~ /blastn/i){
$align_feature = new Bio::EnsEMBL::DnaDnaAlignFeature(@args);
- $align_feature->attach_seq($contig);
+# $align_feature->attach_seq($contig);
}elsif($program =~ /blastx/i){
$align_feature = new Bio::EnsEMBL::DnaPepAlignFeature(@args);
- $align_feature->attach_seq($contig);
+# $align_feature->attach_seq($contig);
}else{
$self->throw("\[$program\] is not supported yet");
}
--
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