diff --git a/misc-scripts/xref_mapping/sql/populate_metadata.sql b/misc-scripts/xref_mapping/sql/populate_metadata.sql index 000f433beeb6a9bcf9a0df55e23705df5129c330..41d71afefd4df26a419169cd9483bf7b83fbf894 100644 --- a/misc-scripts/xref_mapping/sql/populate_metadata.sql +++ b/misc-scripts/xref_mapping/sql/populate_metadata.sql @@ -213,5 +213,20 @@ INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date ## UniGene ##INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (6, 9606,'ftp://ftp.ncbi.nih.gov/repository/UniGene/Str.seq.uniq.gz ftp://ftp.ncbi.nih.gov/repository/UniGene/Str.data.gz', '', now(), now(), "UniGeneParser"); +### Dog + +INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 9615, 'ftp://ftp.ebi.ac.uk/pub/databases/uniprot/knowledgebase/uniprot_sprot.dat.gz', '', now(), now(), "UniProtParser"); + +INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 9615, 'ftp://ftp.ebi.ac.uk/pub/databases/uniprot/knowledgebase/uniprot_trembl.dat.gz', '', now(), now(), "UniProtParser"); + +## refseq +INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (3, 9615,'ftp://ftp.ncbi.nih.gov/genomes/Canis_familiaris/protein/protein.gbk.gz', '', now(), now(), "RefSeqGPFFParser"); + +## refseq +INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (4, 9615,'ftp://ftp.ncbi.nih.gov/genomes/Canis_familiaris/RNA/rna.gbk.gz', '', now(), now(), "RefSeqGPFFParser"); + +## GO +INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1070, 9615,'ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/UNIPROT/gene_association.goa_uniprot.gz', '', now(), now(), "GOParser"); + ################################################################################