From 53b2b36f95ae583cb192d50d0faf9fb31be90da9 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Andreas=20Kusalananda=20K=C3=A4h=C3=A4ri?=
<ak4@sanger.ac.uk>
Date: Tue, 7 Sep 2010 08:31:58 +0000
Subject: [PATCH] Remove warning from is_circular(), it was filling up the web
logs.
---
modules/Bio/EnsEMBL/Slice.pm | 5 +----
1 file changed, 1 insertion(+), 4 deletions(-)
diff --git a/modules/Bio/EnsEMBL/Slice.pm b/modules/Bio/EnsEMBL/Slice.pm
index 5d32179703..ba7e091cd0 100644
--- a/modules/Bio/EnsEMBL/Slice.pm
+++ b/modules/Bio/EnsEMBL/Slice.pm
@@ -529,10 +529,7 @@ sub is_toplevel {
sub is_circular {
my ($self) = @_;
- if ( !defined( $self->adaptor() ) ) {
- warning("Slice has no adaptor, assuming it's not circular.");
- return 0;
- }
+ if ( !defined( $self->adaptor() ) ) { return 0 }
if ( !defined( $self->{'circular'} ) ) {
my $attrs = $self->get_all_Attributes('circular_seq');
--
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