From 5e2ba19effce78af580b1334c6307ce578db161a Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Andreas=20Kusalananda=20K=C3=A4h=C3=A4ri?=
<ak4@sanger.ac.uk>
Date: Tue, 27 Jul 2010 10:57:37 +0000
Subject: [PATCH] Merge back revision 1.15 which got lost in last commit.
---
misc-scripts/id_mapping/dump_cache.pl | 10 ++++++----
1 file changed, 6 insertions(+), 4 deletions(-)
diff --git a/misc-scripts/id_mapping/dump_cache.pl b/misc-scripts/id_mapping/dump_cache.pl
index 8761134e5c..cb0ad996b0 100755
--- a/misc-scripts/id_mapping/dump_cache.pl
+++ b/misc-scripts/id_mapping/dump_cache.pl
@@ -228,14 +228,16 @@ sub build_cache_by_seq_region {
my $cmd = qq{./dump_by_seq_region.pl $options --index \$LSB_JOBINDEX};
- my $pipe = qq{|bsub -J$lsf_name\[1-$num_jobs\]\%$concurrent } .
- qq{-o $logpath/dump_by_seq_region.$dbtype.\%I.out } .
- qq{-e $logpath/dump_by_seq_region.$dbtype.\%I.err } .
- $conf->param('lsf_opt_dump_cache');
+ my $pipe =
+ qq{|bsub -J '$lsf_name\[1-$num_jobs\]\%$concurrent' }
+ . qq{-o $logpath/dump_by_seq_region.$dbtype.\%I.out }
+ . qq{-e $logpath/dump_by_seq_region.$dbtype.\%I.err }
+ . $conf->param('lsf_opt_dump_cache');
# run lsf job array
$logger->info("\nSubmitting $num_jobs jobs to lsf.\n");
$logger->debug("$cmd\n\n");
+ $logger->debug("$pipe\n\n");
local *BSUB;
open BSUB, $pipe or
--
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