From 61183785e4c78d70741ff76cc2206332a6ba9ef0 Mon Sep 17 00:00:00 2001
From: Glenn Proctor <gp1@sanger.ac.uk>
Date: Thu, 28 Jul 2005 13:50:46 +0000
Subject: [PATCH] Big fix
---
misc-scripts/regulatory_regions/load_regulatory.pl | 5 ++++-
1 file changed, 4 insertions(+), 1 deletion(-)
diff --git a/misc-scripts/regulatory_regions/load_regulatory.pl b/misc-scripts/regulatory_regions/load_regulatory.pl
index 857a5b2e40..25546af1a0 100755
--- a/misc-scripts/regulatory_regions/load_regulatory.pl
+++ b/misc-scripts/regulatory_regions/load_regulatory.pl
@@ -126,9 +126,12 @@ while (<FILE>) {
# have a unique name, create a composite one. Also set influence for each type.
my $feature_name;
my $influence;
- if ($feature =~ /miRNA_target/i) {
+ if ($method =~ /miRanda/i) {
$feature_name = $id .":" . $seq;
$influence = "negative";
+ } elsif ($method =~ /cisRed/i) {
+ $feature_name = $id .":" . $seq;
+ $influence = "unknown";
}
print STDERR "No feature name for $seq of type $feature on $id.\n" if (!$feature_name);
--
GitLab