From 63bbcd60cd532e22ce454119334d173d598f704f Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Andreas=20Kusalananda=20K=C3=A4h=C3=A4ri?=
<ak4@sanger.ac.uk>
Date: Thu, 12 Aug 2010 15:45:05 +0000
Subject: [PATCH] Modify comment that wasn't right anymore.
---
modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm
index c7a437e8e4..a83919ebca 100644
--- a/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm
+++ b/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm
@@ -631,8 +631,7 @@ FEATURE: while ( $sth->fetch() ) {
}
#
- # If a destination slice was provided convert the coords. If the
- # dest_slice starts at 1 and is foward strand, nothing needs doing.
+ # If a destination slice was provided convert the coords.
#
if ( defined($dest_slice) ) {
if ( $dest_slice_strand == 1 ) {
@@ -707,6 +706,7 @@ FEATURE: while ( $sth->fetch() ) {
} ## end if ( $seq_region_start...)
} else {
# Non-circular chromosome.
+
my $tmp_seq_region_start = $seq_region_start;
$seq_region_start = $dest_slice_end - $seq_region_end + 1;
$seq_region_end = $dest_slice_end - $tmp_seq_region_start + 1;
--
GitLab