From 63f42e2f5e8cff180cfdae29cc9ec288c8f8fabf Mon Sep 17 00:00:00 2001
From: Glenn Proctor <gp1@sanger.ac.uk>
Date: Mon, 20 Dec 2004 10:19:14 +0000
Subject: [PATCH] Species-specific display_xref priorities for tetraodon. Same
as in BasicMapper but Genoscope_* order reversed.
---
.../XrefMapper/tetraodon_nigroviridis.pm | 27 +++++++++++++++++++
1 file changed, 27 insertions(+)
create mode 100644 misc-scripts/xref_mapping/XrefMapper/tetraodon_nigroviridis.pm
diff --git a/misc-scripts/xref_mapping/XrefMapper/tetraodon_nigroviridis.pm b/misc-scripts/xref_mapping/XrefMapper/tetraodon_nigroviridis.pm
new file mode 100644
index 0000000000..c4425f8bf9
--- /dev/null
+++ b/misc-scripts/xref_mapping/XrefMapper/tetraodon_nigroviridis.pm
@@ -0,0 +1,27 @@
+package XrefMapper::tetraodon_nigroviridis;
+
+use XrefMapper::BasicMapper;
+
+use vars '@ISA';
+
+@ISA = qw{ XrefMapper::BasicMapper };
+
+# Same as in BasicMapper but Genoscope order reversed.
+
+sub transcript_display_xref_sources {
+
+ return ('HUGO',
+ 'MarkerSymbol',
+ 'wormbase_transcript',
+ 'flybase_symbol',
+ 'Anopheles_symbol',
+ 'Genoscope_annotated_gene',
+ 'Genoscope_predicted_transcript',
+ 'Uniprot/SWISSPROT',
+ 'RefSeq',
+ 'Uniprot/SPTREMBL',
+ 'LocusLink');
+
+}
+
+1;
--
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