diff --git a/modules/Bio/EnsEMBL/Gene.pm b/modules/Bio/EnsEMBL/Gene.pm index 9f38bf8619946dc7ea9f066ecf50e1cd9a87d800..fe83efdcc5b57b736941f6c28be8802f9ca1a8b1 100755 --- a/modules/Bio/EnsEMBL/Gene.pm +++ b/modules/Bio/EnsEMBL/Gene.pm @@ -1013,8 +1013,12 @@ sub get_all_Transcripts { $self->{'_transcript_array'} = $transcripts; } } - my @array_copy = @{ $self->{'_transcript_array'} }; - return \@array_copy; + my @array_copy; + if (defined $self->{'_transcript_array'}) { + @array_copy = @{ $self->{'_transcript_array'} } ; + return \@array_copy; + } + return; } diff --git a/modules/Bio/EnsEMBL/Utils/TranscriptSelector.pm b/modules/Bio/EnsEMBL/Utils/TranscriptSelector.pm index 033fcb2e855d12848bc77751a16bd72b2b52a8f4..b1177f0bba235795b10c7b55601e35af4a777292 100644 --- a/modules/Bio/EnsEMBL/Utils/TranscriptSelector.pm +++ b/modules/Bio/EnsEMBL/Utils/TranscriptSelector.pm @@ -104,7 +104,7 @@ sub select_canonical_transcript_for_Gene { @transcripts = @$transcript_array; } else { warning('No transcripts attached to gene '.$gene->stable_id); - return undef; + return; } my @encoded; # array of encoded transcripts