diff --git a/misc-scripts/density_feature/submit_density_features.pl b/misc-scripts/density_feature/submit_density_features.pl index 2f23bdb6a9dd8b267a7eff43a4996def97a3bc11..6be8f9d9558e0e045857fe162bcb23791a812404 100644 --- a/misc-scripts/density_feature/submit_density_features.pl +++ b/misc-scripts/density_feature/submit_density_features.pl @@ -366,7 +366,7 @@ $prod_dbh->disconnect; $file_name_end = "_repeat"; $script = "$SERVERROOT/repeat_coverage_calc.pl"; $script_title = "repeat coverage calculation"; - $option = " -d "; + $option = " -pattern "; } case 'gene_density' { for (my $i=0; $i<$host_count;$i++) {