From 72f929178dbdcfcaa39fefaaee0bd39d515f1727 Mon Sep 17 00:00:00 2001
From: Magali Ruffier <mr6@ebi.ac.uk>
Date: Tue, 6 Nov 2012 13:12:25 +0000
Subject: [PATCH] updated regular expression as was not matching lrg url any
more
---
misc-scripts/xref_mapping/XrefParser/HGNCParser.pm | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/misc-scripts/xref_mapping/XrefParser/HGNCParser.pm b/misc-scripts/xref_mapping/XrefParser/HGNCParser.pm
index 809eec03fa..af370fd892 100644
--- a/misc-scripts/xref_mapping/XrefParser/HGNCParser.pm
+++ b/misc-scripts/xref_mapping/XrefParser/HGNCParser.pm
@@ -60,7 +60,7 @@ sub run {
my $type = 'Locus Specific Databases';
my $id = $array[$name_to_array_index->{$type}];
my $source_id = $name_to_source_id->{$type};
- if($id and $id =~ m/http:\/\/www.lrg-sequence.org\/LRG\/(LRG_\d+)\'/x){
+ if($id and $id =~ m/http:\/\/www.lrg-sequence.org\/LRG\/(LRG_\d+)/x){
my $lrg_stable_id = $1;
$self->add_to_direct_xrefs({ stable_id => $lrg_stable_id,
type => 'gene',
--
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