patched test dbs with patch_92_93_c.sql

modules/t/test-genome-DBs/circ/core/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Fri Feb 16 15:28:14 2018
+-- Created on Fri Apr  6 15:15:57 2018
 -- 
 
 BEGIN TRANSACTION;
@@ -423,7 +423,7 @@ CREATE TABLE identity_xref (
 --
 CREATE TABLE interpro (
   interpro_ac varchar(40) NOT NULL DEFAULT '',
-  id varchar(40) NOT NULL DEFAULT ''
+  id varchar(40) NOT NULL
 );
 
 CREATE UNIQUE INDEX accession_idx ON interpro (interpro_ac, id);

modules/t/test-genome-DBs/circ/core/meta.txt

@@ -118,3 +118,4 @@
 118	\N	patch	patch_91_92_b.sql|add_cigar_line_align_type
 119	\N	patch	patch_92_93_a.sql|schema_version
 120	\N	patch	patch_92_93_b.sql|biotype_table
+121	\N	patch	patch_92_93_c.sql|collate_index_interpro

modules/t/test-genome-DBs/circ/core/table.sql

@@ -375,7 +375,7 @@ CREATE TABLE `identity_xref` (
 
 CREATE TABLE `interpro` (
   `interpro_ac` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
-  `id` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
+  `id` varchar(40) COLLATE latin1_bin NOT NULL,
   UNIQUE KEY `accession_idx` (`interpro_ac`,`id`),
   KEY `id_idx` (`id`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1 COLLATE=latin1_bin;
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=121 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=122 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',

modules/t/test-genome-DBs/homo_sapiens/core/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Fri Feb 16 15:28:17 2018
+-- Created on Fri Apr  6 15:16:01 2018
 -- 
 
 BEGIN TRANSACTION;
@@ -423,7 +423,7 @@ CREATE TABLE identity_xref (
 --
 CREATE TABLE interpro (
   interpro_ac varchar(40) NOT NULL DEFAULT '',
-  id varchar(40) NOT NULL DEFAULT ''
+  id varchar(40) NOT NULL
 );
 
 CREATE UNIQUE INDEX accession_idx ON interpro (interpro_ac, id);

modules/t/test-genome-DBs/homo_sapiens/core/meta.txt

@@ -97,3 +97,4 @@
 164	\N	patch	patch_91_92_b.sql|add_cigar_line_align_type
 165	\N	patch	patch_92_93_a.sql|schema_version
 166	\N	patch	patch_92_93_b.sql|biotype_table
+167	\N	patch	patch_92_93_c.sql|collate_index_interpro

modules/t/test-genome-DBs/homo_sapiens/core/table.sql

@@ -116,7 +116,7 @@ CREATE TABLE `biotype` (
   `so_acc` varchar(64) DEFAULT NULL,
   PRIMARY KEY (`biotype_id`),
   UNIQUE KEY `name_type_idx` (`name`,`object_type`)
-) ENGINE=MyISAM DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=88 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `coord_system` (
   `coord_system_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
@@ -375,7 +375,7 @@ CREATE TABLE `identity_xref` (
 
 CREATE TABLE `interpro` (
   `interpro_ac` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
-  `id` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
+  `id` varchar(40) COLLATE latin1_bin NOT NULL,
   UNIQUE KEY `accession_idx` (`interpro_ac`,`id`),
   KEY `id_idx` (`id`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1 COLLATE=latin1_bin;
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=167 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=168 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',

modules/t/test-genome-DBs/homo_sapiens/empty/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Fri Feb 16 15:28:20 2018
+-- Created on Fri Apr  6 15:16:04 2018
 -- 
 
 BEGIN TRANSACTION;
@@ -423,7 +423,7 @@ CREATE TABLE identity_xref (
 --
 CREATE TABLE interpro (
   interpro_ac varchar(40) NOT NULL DEFAULT '',
-  id varchar(40) NOT NULL DEFAULT ''
+  id varchar(40) NOT NULL
 );
 
 CREATE UNIQUE INDEX accession_idx ON interpro (interpro_ac, id);

modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt

@@ -97,3 +97,4 @@
 146	\N	patch	patch_91_92_b.sql|add_cigar_line_align_type
 147	\N	patch	patch_92_93_a.sql|schema_version
 148	\N	patch	patch_92_93_b.sql|biotype_table
+149	\N	patch	patch_92_93_c.sql|collate_index_interpro

modules/t/test-genome-DBs/homo_sapiens/empty/table.sql

@@ -375,7 +375,7 @@ CREATE TABLE `identity_xref` (
 
 CREATE TABLE `interpro` (
   `interpro_ac` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
-  `id` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
+  `id` varchar(40) COLLATE latin1_bin NOT NULL,
   UNIQUE KEY `accession_idx` (`interpro_ac`,`id`),
   KEY `id_idx` (`id`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1 COLLATE=latin1_bin;
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=149 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=150 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',

modules/t/test-genome-DBs/homo_sapiens/patch/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Fri Feb 16 15:28:23 2018
+-- Created on Fri Apr  6 15:16:07 2018
 -- 
 
 BEGIN TRANSACTION;
@@ -423,7 +423,7 @@ CREATE TABLE identity_xref (
 --
 CREATE TABLE interpro (
   interpro_ac varchar(40) NOT NULL DEFAULT '',
-  id varchar(40) NOT NULL DEFAULT ''
+  id varchar(40) NOT NULL
 );
 
 CREATE UNIQUE INDEX accession_idx ON interpro (interpro_ac, id);

modules/t/test-genome-DBs/homo_sapiens/patch/meta.txt

@@ -102,3 +102,4 @@
 2109	\N	patch	patch_91_92_b.sql|add_cigar_line_align_type
 2110	\N	patch	patch_92_93_a.sql|schema_version
 2111	\N	patch	patch_92_93_b.sql|biotype_table
+2112	\N	patch	patch_92_93_c.sql|collate_index_interpro

modules/t/test-genome-DBs/homo_sapiens/patch/table.sql

@@ -375,7 +375,7 @@ CREATE TABLE `identity_xref` (
 
 CREATE TABLE `interpro` (
   `interpro_ac` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
-  `id` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
+  `id` varchar(40) COLLATE latin1_bin NOT NULL,
   UNIQUE KEY `accession_idx` (`interpro_ac`,`id`),
   KEY `id_idx` (`id`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1 COLLATE=latin1_bin;
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=2112 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=2113 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',

modules/t/test-genome-DBs/mapping/core/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Fri Feb 16 15:28:26 2018
+-- Created on Fri Apr  6 15:16:11 2018
 -- 
 
 BEGIN TRANSACTION;
@@ -423,7 +423,7 @@ CREATE TABLE identity_xref (
 --
 CREATE TABLE interpro (
   interpro_ac varchar(40) NOT NULL DEFAULT '',
-  id varchar(40) NOT NULL DEFAULT ''
+  id varchar(40) NOT NULL
 );
 
 CREATE UNIQUE INDEX accession_idx ON interpro (interpro_ac, id);

modules/t/test-genome-DBs/mapping/core/meta.txt

@@ -58,3 +58,4 @@
 151	\N	patch	patch_91_92_b.sql|add_cigar_line_align_type
 152	\N	patch	patch_92_93_a.sql|schema_version
 153	\N	patch	patch_92_93_b.sql|biotype_table
+154	\N	patch	patch_92_93_c.sql|collate_index_interpro

modules/t/test-genome-DBs/mapping/core/table.sql

@@ -375,7 +375,7 @@ CREATE TABLE `identity_xref` (
 
 CREATE TABLE `interpro` (
   `interpro_ac` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
-  `id` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
+  `id` varchar(40) COLLATE latin1_bin NOT NULL,
   UNIQUE KEY `accession_idx` (`interpro_ac`,`id`),
   KEY `id_idx` (`id`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1 COLLATE=latin1_bin;
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=154 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=155 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',

modules/t/test-genome-DBs/multi/compara/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Fri Feb 16 15:28:28 2018
+-- Created on Fri Apr  6 15:16:13 2018
 -- 
 
 BEGIN TRANSACTION;

modules/t/test-genome-DBs/mus_musculus/core/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Fri Feb 16 15:28:31 2018
+-- Created on Fri Apr  6 15:16:17 2018
 -- 
 
 BEGIN TRANSACTION;
@@ -423,7 +423,7 @@ CREATE TABLE identity_xref (
 --
 CREATE TABLE interpro (
   interpro_ac varchar(40) NOT NULL DEFAULT '',
-  id varchar(40) NOT NULL DEFAULT ''
+  id varchar(40) NOT NULL
 );
 
 CREATE UNIQUE INDEX accession_idx ON interpro (interpro_ac, id);

modules/t/test-genome-DBs/mus_musculus/core/meta.txt

@@ -175,3 +175,4 @@
 1687	\N	patch	patch_91_92_b.sql|add_cigar_line_align_type
 1688	\N	patch	patch_92_93_a.sql|schema_version
 1689	\N	patch	patch_92_93_b.sql|biotype_table
+1690	\N	patch	patch_92_93_c.sql|collate_index_interpro

modules/t/test-genome-DBs/mus_musculus/core/table.sql

@@ -375,7 +375,7 @@ CREATE TABLE `identity_xref` (
 
 CREATE TABLE `interpro` (
   `interpro_ac` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
-  `id` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
+  `id` varchar(40) COLLATE latin1_bin NOT NULL,
   UNIQUE KEY `accession_idx` (`interpro_ac`,`id`),
   KEY `id_idx` (`id`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1 COLLATE=latin1_bin;
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=1690 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=1691 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',

modules/t/test-genome-DBs/nameless/core/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Fri Feb 16 15:28:34 2018
+-- Created on Fri Apr  6 15:16:20 2018
 -- 
 
 BEGIN TRANSACTION;
@@ -412,7 +412,7 @@ CREATE TABLE identity_xref (
 --
 CREATE TABLE interpro (
   interpro_ac varchar(40) NOT NULL DEFAULT '',
-  id varchar(40) NOT NULL DEFAULT ''
+  id varchar(40) NOT NULL
 );
 
 CREATE UNIQUE INDEX accession_idx ON interpro (interpro_ac, id);