Commit 766f0ee8 authored by Ewan Birney's avatar Ewan Birney
Browse files

start of SliceFactory - stubs for new_slice and new_web_slice

parent b0d25395
#
# Ensembl module for Bio::EnsEMBL::Assembly::SliceFactory
#
# Cared for by Ewan Birney <ensembl-dev@ebi.ac.uk>
#
# Copyright Ewan Birney
#
# You may distribute this module under the same terms as perl itself
# POD documentation - main docs before the code
=head1 NAME
Bio::EnsEMBL::Assembly::SliceFactory - Factory for building slices
=head1 SYNOPSIS
$slice = Bio::EnsEMBL::Assembly::SliceFactory->new_slice($chr,$start,$end,$type);
$webslice = Bio::EnsEMBL::Assembly::SliceFactory->new_web_slice($chr,$start,$end,$type);
=head1 DESCRIPTION
Factory for getting out slices of assemblies. WebSlice is the highly
accelerated version for the web site.
=head1 AUTHOR - Ewan Birney
This modules is part of the Ensembl project http://www.ensembl.org
Email ensembl-dev@ebi.ac.uk
Describe contact details here
=head1 APPENDIX
The rest of the documentation details each of the object
methods. Internal methods are usually preceded with a _
=cut
# Let the code begin...
package Bio::EnsEMBL::Assembly::SliceFactory;
use vars qw(@ISA);
use strict;
# Object preamble - inherits from Bio::Root::RootI
=head2 new_slice
Title : new_slice
Usage :
Function:
Example :
Returns :
Args :
=cut
sub new_slice{
my ($chr,$start,$end,$type) = @_;
die "Not implemented new slice yet";
}
=head2 new_web_slice
Title : new_web_slice
Usage :
Function:
Example :
Returns :
Args :
=cut
sub new_web_slice{
my ($chr,$start,$end,$type) = @_;
die "Not implemented new slice yet";
}
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment